BLASTX nr result

ID: Angelica22_contig00027228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027228
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21655.3| unnamed protein product [Vitis vinifera]              186   5e-45
ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog ...   163   5e-38
ref|XP_003540645.1| PREDICTED: DNA repair protein XRCC2 homolog ...   154   3e-35
ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidop...   135   2e-29
ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidop...   134   4e-29

>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  186 bits (473), Expect = 5e-45
 Identities = 95/183 (51%), Positives = 123/183 (67%), Gaps = 5/183 (2%)
 Frame = +3

Query: 81  CIKNCLFLATLKTMHTQIQERKENHGIGVHVLMIDSIGAFYWTDRALSSLSLGDVNRKGL 260
           C  +  FLATLKT+  ++Q  +E HG+  H LMIDSIGAFYW DRA +SL L   +RK L
Sbjct: 136 CYDSFEFLATLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRASTSLHLESNSRKRL 195

Query: 261 SLQAVSEIVVEELQKLLQLHPMLILTTKTVNLQDTFFKHEIKSAPRKVFSEDASCLRATR 440
           SLQ++SE VVEE++KLL +HPML+L TK   L DT+  +E+K    K+ S D S LR   
Sbjct: 196 SLQSISETVVEEIRKLLLVHPMLVLATKATILGDTYSTNEVKRTSMKLSSNDPSNLRTVT 255

Query: 441 SKPQNIPYREYMPSVWQNFVTHRVLIRPSDDEIPNP-----PIFSSEWLLPLLNTIERFT 605
             PQ + YRE+MP VWQ+FVTHR+L+R +DD+  N       IF SEWL+P LN  ++F 
Sbjct: 256 GGPQKLSYREFMPLVWQSFVTHRILVRAADDDPANSKYQSRSIFLSEWLMPSLNFSDKFI 315

Query: 606 VGD 614
           V D
Sbjct: 316 VRD 318


>ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog [Vitis vinifera]
          Length = 315

 Score =  163 bits (413), Expect = 5e-38
 Identities = 80/147 (54%), Positives = 103/147 (70%)
 Frame = +3

Query: 81  CIKNCLFLATLKTMHTQIQERKENHGIGVHVLMIDSIGAFYWTDRALSSLSLGDVNRKGL 260
           C  +  FLATLKT+  ++Q  +E HG+  H LMIDSIGAFYW DRA +SL L   +RK L
Sbjct: 151 CYDSFEFLATLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRASTSLHLESNSRKRL 210

Query: 261 SLQAVSEIVVEELQKLLQLHPMLILTTKTVNLQDTFFKHEIKSAPRKVFSEDASCLRATR 440
           SLQ++SE VVEE++KLL +HPML+L TK   L DT+  +E+K    K+ S D S LR   
Sbjct: 211 SLQSISETVVEEIRKLLLVHPMLVLATKATILGDTYSTNEVKRTSMKLSSNDPSNLRTVT 270

Query: 441 SKPQNIPYREYMPSVWQNFVTHRVLIR 521
             PQ + YRE+MP VWQ+FVTHR+L+R
Sbjct: 271 GGPQKLSYREFMPLVWQSFVTHRILVR 297


>ref|XP_003540645.1| PREDICTED: DNA repair protein XRCC2 homolog [Glycine max]
          Length = 310

 Score =  154 bits (389), Expect = 3e-35
 Identities = 84/184 (45%), Positives = 115/184 (62%), Gaps = 6/184 (3%)
 Frame = +3

Query: 81  CIKNCLFLATLKTMHTQIQERKENHGIGVHVLMIDSIGAFYWTDRALSSLSLGDVNRKGL 260
           C  +  FL TL+T+H ++++ KE HG+GVH+LMIDSIGAF+W DRA   LS  +  +K L
Sbjct: 125 CYDSFEFLHTLRTLHCRLEKEKEVHGVGVHLLMIDSIGAFHWMDRASMFLSQRENRKKKL 184

Query: 261 SLQAVSEIVVEELQKLLQLHPMLILTTKTVNLQDTFFKHEIKSAPRKVFSE-DASCLRAT 437
            LQ VSE VV+ ++KLLQ+HPMLI+ TK+V      F +   +A  +V    +  C +  
Sbjct: 185 FLQTVSEAVVQNIKKLLQVHPMLIIATKSV-----IFGNRYSTASNEVKGNMEERCSKNV 239

Query: 438 RSKPQNIPYREYMPSVWQNFVTHRVLIRPSDD-----EIPNPPIFSSEWLLPLLNTIERF 602
               QN  YREYMPSVWQ+FVTHR+L+R SD+        N   +  EWLLP L+  ++ 
Sbjct: 240 TRNHQNYLYREYMPSVWQSFVTHRILVRSSDEHPVTTNNQNSSFYLLEWLLPRLSFPDKI 299

Query: 603 TVGD 614
            V D
Sbjct: 300 VVKD 303


>ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
           gi|332010527|gb|AED97910.1| DNA repair protein
           XRCC2-like protein [Arabidopsis thaliana]
          Length = 342

 Score =  135 bits (339), Expect = 2e-29
 Identities = 86/190 (45%), Positives = 115/190 (60%), Gaps = 6/190 (3%)
 Frame = +3

Query: 81  CIKNCLFLATLKTMHTQIQERKENHGIGVHVLMIDSIGAFYWTDRALSSLSLGDVNRKGL 260
           C  +   L++LKT+H +IQ++ E  G  V VLMIDSIGAF+WTDR  SSL+L   NRK L
Sbjct: 157 CYDSLELLSSLKTLHYRIQQQ-EACGSQVGVLMIDSIGAFHWTDRLSSSLALETHNRKSL 215

Query: 261 SLQAVSEIVVEELQKLLQLHPMLILTTKTVNLQDTFFKHEIKSAPRKVFSEDASCLRATR 440
           SL  V E +V+EL+KLL +H +++L TK    ++   K+      RKV S D        
Sbjct: 216 SLTNVVETIVQELKKLLLVHSLVVLATKGTIYEE---KYPANENNRKVSSNDHFSGNVA- 271

Query: 441 SKPQNIPYREYMPSVWQNFVTHRVLIRPSDD------EIPNPPIFSSEWLLPLLNTIERF 602
           SK Q  P+RE+MPS WQ FVTH+++IR S D         N   +S EWL P L+ I+RF
Sbjct: 272 SKAQQPPFREFMPSSWQAFVTHKIIIRKSADYQSLQTGQQNLLAYSLEWLQPQLSRIDRF 331

Query: 603 TVGDNVILNV 632
            V D+V  N+
Sbjct: 332 IV-DDVFFNI 340


>ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
           gi|55583880|sp|Q682D3.2|XRCC2_ARATH RecName: Full=DNA
           repair protein XRCC2 homolog; AltName: Full=X-ray repair
           cross-complementing protein 2 homolog; Short=AtXRCC2
           gi|27524915|emb|CAD12880.1| putative X-ray repair
           cross-complementing protein 2 [Arabidopsis thaliana]
           gi|332010528|gb|AED97911.1| DNA repair protein
           XRCC2-like protein [Arabidopsis thaliana]
          Length = 372

 Score =  134 bits (336), Expect = 4e-29
 Identities = 84/184 (45%), Positives = 111/184 (60%), Gaps = 6/184 (3%)
 Frame = +3

Query: 81  CIKNCLFLATLKTMHTQIQERKENHGIGVHVLMIDSIGAFYWTDRALSSLSLGDVNRKGL 260
           C  +   L++LKT+H +IQ++ E  G  V VLMIDSIGAF+WTDR  SSL+L   NRK L
Sbjct: 157 CYDSLELLSSLKTLHYRIQQQ-EACGSQVGVLMIDSIGAFHWTDRLSSSLALETHNRKSL 215

Query: 261 SLQAVSEIVVEELQKLLQLHPMLILTTKTVNLQDTFFKHEIKSAPRKVFSEDASCLRATR 440
           SL  V E +V+EL+KLL +H +++L TK    ++   K+      RKV S D        
Sbjct: 216 SLTNVVETIVQELKKLLLVHSLVVLATKGTIYEE---KYPANENNRKVSSNDHFSGNVA- 271

Query: 441 SKPQNIPYREYMPSVWQNFVTHRVLIRPSDD------EIPNPPIFSSEWLLPLLNTIERF 602
           SK Q  P+RE+MPS WQ FVTH+++IR S D         N   +S EWL P L+ I+RF
Sbjct: 272 SKAQQPPFREFMPSSWQAFVTHKIIIRKSADYQSLQTGQQNLLAYSLEWLQPQLSRIDRF 331

Query: 603 TVGD 614
            V D
Sbjct: 332 IVDD 335


Top