BLASTX nr result

ID: Angelica22_contig00027124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027124
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601137.1| Auxin response factor [Medicago truncatula] ...    44   3e-06
ref|XP_002301020.1| predicted protein [Populus trichocarpa] gi|2...    42   4e-06

>ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
            gi|355490185|gb|AES71388.1| Auxin response factor
            [Medicago truncatula]
          Length = 593

 Score = 43.9 bits (102), Expect(2) = 3e-06
 Identities = 22/56 (39%), Positives = 33/56 (58%)
 Frame = -3

Query: 1044 GLLPHGDGEVFPVKGSQGARSDQI*FNPLLMKFSSYPTGVQGARPDQICASSVYNF 877
            G+L  GDG+ F + G   + + Q+  N  L+ +S++P G+QGAR D    SS  NF
Sbjct: 403  GVLTDGDGDPFSITGFTNSTTGQL--NQPLLSYSTFPAGMQGARHDLFSVSSFSNF 456



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -2

Query: 1252 WPANQITWVDPDVVQNMTNVSPWQVQCVS 1166
            W    ITW +P+V+Q    VSPWQV+ +S
Sbjct: 355  WRMLHITWDEPEVLQTSKWVSPWQVELLS 383


>ref|XP_002301020.1| predicted protein [Populus trichocarpa] gi|222842746|gb|EEE80293.1|
            predicted protein [Populus trichocarpa]
          Length = 237

 Score = 42.0 bits (97), Expect(2) = 4e-06
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
 Frame = -2

Query: 1237 ITWVDPDVVQNMTNVSPWQVQCV--SLPEHSEV*GAKKCKISVDSGF 1103
            ITW +P+V+QN+  VSPWQV+ V  +LP        KK +   DSGF
Sbjct: 1    ITWDEPEVLQNVKRVSPWQVEFVATTLPLQDASPPMKKLRYPNDSGF 47



 Score = 36.2 bits (82), Expect(2) = 4e-06
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = -3

Query: 1065 VKISEDMGLLPHGDGEVFPVKGSQGARSDQI*FNPLLMKFSSYPTGVQGARPDQICASSV 886
            ++   D G L +G+   FP+     +R+  +  N  ++ +S++P G+QGAR D     S+
Sbjct: 39   LRYPNDSGFLTNGE-LFFPMSDLTNSRTGHM--NASMLNYSTFPAGMQGARQDPFSTFSL 95

Query: 885  YNFIHE 868
             N I E
Sbjct: 96   SNLISE 101


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