BLASTX nr result

ID: Angelica22_contig00027084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027084
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB16993.1| unknown [Solanum tuberosum]                             70   1e-10
gb|AFK48775.1| unknown [Lotus japonicus]                               70   2e-10
tpg|DAA58770.1| TPA: hypothetical protein ZEAMMB73_897705 [Zea m...    70   2e-10
ref|XP_003539108.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosoma...    70   2e-10
ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [C...    69   3e-10

>gb|ABB16993.1| unknown [Solanum tuberosum]
          Length = 142

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/50 (72%), Positives = 38/50 (76%)
 Frame = +3

Query: 129 RGL*AWHKLKSHSWRQRWAD*SYKKSHLGKG*KNPFAGSSRAKGNILEKI 278
           RG+ A  KLKSH  RQRWAD SYKKSHLG   K PFAGSS AKG +LEKI
Sbjct: 5   RGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54


>gb|AFK48775.1| unknown [Lotus japonicus]
          Length = 142

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/50 (72%), Positives = 38/50 (76%)
 Frame = +3

Query: 129 RGL*AWHKLKSHSWRQRWAD*SYKKSHLGKG*KNPFAGSSRAKGNILEKI 278
           RG+ A  KLKSH  RQRWAD SYKKSHLG   K PFAGSS AKG +LEKI
Sbjct: 5   RGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54


>tpg|DAA58770.1| TPA: hypothetical protein ZEAMMB73_897705 [Zea mays]
          Length = 554

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/65 (58%), Positives = 43/65 (66%)
 Frame = +3

Query: 84  ELICSLCWHICL*EDRGL*AWHKLKSHSWRQRWAD*SYKKSHLGKG*KNPFAGSSRAKGN 263
           EL  SL W +   + RG+ A  KLK+H   QRWAD +YKKSHLG   K PFAGSS AKG 
Sbjct: 6   ELESSLLWFMSKRKTRGMGARRKLKTHIRNQRWADKAYKKSHLGNEWKKPFAGSSHAKGI 65

Query: 264 ILEKI 278
           IL KI
Sbjct: 66  ILAKI 70


>ref|XP_003539108.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S23-like
           [Glycine max]
          Length = 159

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/64 (60%), Positives = 42/64 (65%)
 Frame = +3

Query: 87  LICSLCWHICL*EDRGL*AWHKLKSHSWRQRWAD*SYKKSHLGKG*KNPFAGSSRAKGNI 266
           L C L   I   +  G+ A  KLKSH  RQRWAD SYKKSHLG   K PFAGSS AKG +
Sbjct: 5   LSCGLLLPIESLKTHGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV 64

Query: 267 LEKI 278
           LEKI
Sbjct: 65  LEKI 68


>ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [Cucumis sativus]
           gi|449452122|ref|XP_004143809.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449463681|ref|XP_004149560.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449483351|ref|XP_004156564.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449508653|ref|XP_004163373.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449521770|ref|XP_004167902.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
          Length = 142

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/50 (70%), Positives = 38/50 (76%)
 Frame = +3

Query: 129 RGL*AWHKLKSHSWRQRWAD*SYKKSHLGKG*KNPFAGSSRAKGNILEKI 278
           RG+ A  KLKSH  RQRWAD +YKKSHLG   K PFAGSS AKG +LEKI
Sbjct: 5   RGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54


Top