BLASTX nr result

ID: Angelica22_contig00027082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027082
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thalia...    73   3e-11
ref|XP_003540829.1| PREDICTED: condensin complex subunit 2-like ...    72   6e-11
ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...    71   1e-10
emb|CBI28838.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...    71   1e-10

>ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thaliana]
           gi|75217252|sp|Q564K3.1|CND2_ARATH RecName:
           Full=Condensin complex subunit 2; AltName:
           Full=Chromosome-associated protein H; Short=AtCAP-H;
           AltName: Full=Non-SMC condensin I complex subunit H;
           AltName: Full=Protein EMBRYO DEFECTIVE 2795
           gi|62533251|dbj|BAD95575.1| chromosome associate protein
           subunit H [Arabidopsis thaliana]
           gi|330253609|gb|AEC08703.1| condensin complex subunit 2
           [Arabidopsis thaliana]
          Length = 671

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/60 (60%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
 Frame = +3

Query: 42  IYGCCRVLFDSLEVPAKCSSCSNLHD-TETIDISFAQECSKEMVLNMSKEFEISPSLREI 218
           +YG C+VLFDS E+P K  S +N HD +ETID+SF +EC ++MVLNM K+ EI PSLR I
Sbjct: 235 VYGGCQVLFDSQEIPGKLVSSANKHDKSETIDLSFVKECVEQMVLNMRKKDEIVPSLRAI 294


>ref|XP_003540829.1| PREDICTED: condensin complex subunit 2-like [Glycine max]
          Length = 668

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/60 (60%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
 Frame = +3

Query: 42  IYGCCRVLFDSLEVPAKCSSCSNLHD-TETIDISFAQECSKEMVLNMSKEFEISPSLREI 218
           +YG CRVLFDS EVPAKC +  N  D ++TID+SFA++C  +MVL+M  + EISPSLR I
Sbjct: 233 VYGDCRVLFDSQEVPAKCMASQNQSDISDTIDLSFAKDCIDQMVLDMRVKDEISPSLRTI 292


>ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Cucumis sativus] gi|449490353|ref|XP_004158580.1|
           PREDICTED: LOW QUALITY PROTEIN: condensin complex
           subunit 2-like [Cucumis sativus]
          Length = 667

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = +3

Query: 42  IYGCCRVLFDSLEVPAKCSSCSNLH-DTETIDISFAQECSKEMVLNMSKEFEISPSLREI 218
           +YG CRVLFDS EVP KC S  N    ++ IDISFA++C +EMVLNM  + EISP+LR I
Sbjct: 238 VYGACRVLFDSDEVPGKCMSFENRQGSSDMIDISFAKDCIEEMVLNMRVKDEISPTLRNI 297


>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = +3

Query: 42  IYGCCRVLFDSLEVPAKCSSCSN-LHDTETIDISFAQECSKEMVLNMSKEFEISPSLREI 218
           +YG CRVLFDS E+P  C SC+  L  ++TID+SFA+E  ++MVLNM  + EISP+LR I
Sbjct: 239 VYGGCRVLFDSFEIPGNCMSCATELDKSDTIDLSFAKESIEQMVLNMRTKDEISPTLRNI 298


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = +3

Query: 42  IYGCCRVLFDSLEVPAKCSSCSN-LHDTETIDISFAQECSKEMVLNMSKEFEISPSLREI 218
           +YG CRVLFDS E+P  C SC+  L  ++TID+SFA+E  ++MVLNM  + EISP+LR I
Sbjct: 239 VYGGCRVLFDSFEIPGNCMSCATELDKSDTIDLSFAKESIEQMVLNMRTKDEISPTLRNI 298


Top