BLASTX nr result

ID: Angelica22_contig00026832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00026832
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634397.1| PREDICTED: putative transcription elongation...    62   1e-07
ref|XP_002265283.2| PREDICTED: putative transcription elongation...    62   1e-07
ref|XP_002313759.1| global transcription factor group [Populus t...    62   1e-07
emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]    62   1e-07
ref|XP_004162900.1| PREDICTED: putative transcription elongation...    62   1e-07

>ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like isoform 2 [Vitis vinifera]
          Length = 1044

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 30/38 (78%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +1

Query: 634 PYVQPRSPPSNTYEAPTPGSGWA-TLSGCYSEAGTPRD 744
           P  QP SPPS TYEAPTPGSGWA T  G YSEAGTPRD
Sbjct: 841 PQYQPGSPPSRTYEAPTPGSGWASTPGGNYSEAGTPRD 878


>ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like isoform 1 [Vitis vinifera]
           gi|302142757|emb|CBI19960.3| unnamed protein product
           [Vitis vinifera]
          Length = 1034

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 30/38 (78%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +1

Query: 634 PYVQPRSPPSNTYEAPTPGSGWA-TLSGCYSEAGTPRD 744
           P  QP SPPS TYEAPTPGSGWA T  G YSEAGTPRD
Sbjct: 831 PQYQPGSPPSRTYEAPTPGSGWASTPGGNYSEAGTPRD 868


>ref|XP_002313759.1| global transcription factor group [Populus trichocarpa]
           gi|222850167|gb|EEE87714.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1042

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 30/38 (78%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +1

Query: 634 PYVQPRSPPSNTYEAPTPGSGWA-TLSGCYSEAGTPRD 744
           P  QP SPPS TYEAPTPGSGWA T  G YSEAGTPRD
Sbjct: 837 PQYQPGSPPSGTYEAPTPGSGWASTPGGNYSEAGTPRD 874


>emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]
          Length = 1107

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 30/38 (78%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +1

Query: 634 PYVQPRSPPSNTYEAPTPGSGWA-TLSGCYSEAGTPRD 744
           P  QP SPPS TYEAPTPGSGWA T  G YSEAGTPRD
Sbjct: 840 PQYQPGSPPSRTYEAPTPGSGWASTPGGNYSEAGTPRD 877


>ref|XP_004162900.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like, partial [Cucumis sativus]
          Length = 849

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +1

Query: 634 PYVQPRSPPSNTYEAPTPGSGWA-TLSGCYSEAGTPRD 744
           P  QP SPPS TYEAPTPGSGWA T  G YS+AGTPRD
Sbjct: 644 PQYQPGSPPSRTYEAPTPGSGWANTPGGSYSDAGTPRD 681


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