BLASTX nr result

ID: Angelica22_contig00026516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00026516
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...   199   1e-48
emb|CBI36804.3| unnamed protein product [Vitis vinifera]              199   1e-48
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab...   162   1e-37
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   159   7e-37
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from...   158   2e-36

>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score =  199 bits (505), Expect = 1e-48
 Identities = 120/258 (46%), Positives = 154/258 (59%), Gaps = 1/258 (0%)
 Frame = -1

Query: 774 QDKVIDDCPSFFVRDFPERKDQNAKSIAEDFNHHQKVDMGVPAHFHSDSSS-YILTPAIS 598
           Q  ++D+   FFV D  E K    K    D N+HQ+V MGVP H+ +D S  Y+LTP  S
Sbjct: 145 QGTILDEFIPFFVGDCQEEKKVWNKCY-NDLNNHQEVGMGVPTHYQNDGSFLYLLTPVFS 203

Query: 597 PPSADSVDRWLSQDDPGSLGILIKSHGSLAAARKDPMLDSGLLPQDDTIIAQVKQQFKGS 418
           PPSAD V RWL  DD  +    +   GS++  +  P+LD            Q   +   +
Sbjct: 204 PPSADCVHRWLLHDDTDTSAEPLPV-GSVSHVK--PVLD------------QQNHEIHDN 248

Query: 417 HNAGLRPLHSDSTKISENEVTTSFIKQDTCFFEDTSQISAPDGKSKSTPPSQIGFRDPAS 238
            NA     H    + ++ +     +K+ T   +D SQIS P+ KSK TP SQIGFRDPAS
Sbjct: 249 LNAKKNAFHDKVPEKTQVKGNIMKVKKCTNCSQDISQISGPEEKSKPTPLSQIGFRDPAS 308

Query: 237 VGGGQQLTMFSIEVQAQSKGDSRPDPRLDAINFIVLVIFEDDNLMTETHVLLRSDTVPAR 58
           VGGGQQ+T+ SIE+QA+S+GD RPDPR DAIN IVL+I EDD+   E  VL RS+  P +
Sbjct: 309 VGGGQQVTLLSIEIQAESRGDLRPDPRYDAINVIVLLIQEDDDSALEVFVLCRSNIEPCQ 368

Query: 57  RNLDGISACKILVFSEEK 4
           R LDGIS CK+LV SEEK
Sbjct: 369 RKLDGISGCKVLVSSEEK 386


>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  199 bits (505), Expect = 1e-48
 Identities = 120/258 (46%), Positives = 154/258 (59%), Gaps = 1/258 (0%)
 Frame = -1

Query: 774  QDKVIDDCPSFFVRDFPERKDQNAKSIAEDFNHHQKVDMGVPAHFHSDSSS-YILTPAIS 598
            Q  ++D+   FFV D  E K    K    D N+HQ+V MGVP H+ +D S  Y+LTP  S
Sbjct: 731  QGTILDEFIPFFVGDCQEEKKVWNKCY-NDLNNHQEVGMGVPTHYQNDGSFLYLLTPVFS 789

Query: 597  PPSADSVDRWLSQDDPGSLGILIKSHGSLAAARKDPMLDSGLLPQDDTIIAQVKQQFKGS 418
            PPSAD V RWL  DD  +    +   GS++  +  P+LD            Q   +   +
Sbjct: 790  PPSADCVHRWLLHDDTDTSAEPLPV-GSVSHVK--PVLD------------QQNHEIHDN 834

Query: 417  HNAGLRPLHSDSTKISENEVTTSFIKQDTCFFEDTSQISAPDGKSKSTPPSQIGFRDPAS 238
             NA     H    + ++ +     +K+ T   +D SQIS P+ KSK TP SQIGFRDPAS
Sbjct: 835  LNAKKNAFHDKVPEKTQVKGNIMKVKKCTNCSQDISQISGPEEKSKPTPLSQIGFRDPAS 894

Query: 237  VGGGQQLTMFSIEVQAQSKGDSRPDPRLDAINFIVLVIFEDDNLMTETHVLLRSDTVPAR 58
            VGGGQQ+T+ SIE+QA+S+GD RPDPR DAIN IVL+I EDD+   E  VL RS+  P +
Sbjct: 895  VGGGQQVTLLSIEIQAESRGDLRPDPRYDAINVIVLLIQEDDDSALEVFVLCRSNIEPCQ 954

Query: 57   RNLDGISACKILVFSEEK 4
            R LDGIS CK+LV SEEK
Sbjct: 955  RKLDGISGCKVLVSSEEK 972


>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
            lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
            ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
          Length = 1899

 Score =  162 bits (410), Expect = 1e-37
 Identities = 101/257 (39%), Positives = 145/257 (56%), Gaps = 5/257 (1%)
 Frame = -1

Query: 756  DCPSFFVRDFPERKDQNAKSIAEDFNHHQKVDMGVPAHFHSDSSS-YILTPAISPPSADS 580
            D P F + D    KD N        +  Q   +G+P H  +D S+ Y+L PA+SPPS DS
Sbjct: 871  DIPFFPLEDTGINKDGNK-------HFFQGASLGIPLHHLNDGSNLYLLAPALSPPSVDS 923

Query: 579  VDRWLSQDDPGSLGILIKSHGSLAAARKDPMLDSGLLPQDDTIIAQVKQQFKGSHNAGLR 400
            V +W+++D  G   I      S     +D  +D G    D    + V    +   +    
Sbjct: 924  VLQWIAEDK-GDYNI-----DSEKQPLEDDHIDRGASFTDLASASNVVSVSEHVQHHNNV 977

Query: 399  PLHSDSTKISENEVTT----SFIKQDTCFFEDTSQISAPDGKSKSTPPSQIGFRDPASVG 232
             ++S+S   +E+E+      +F+  ++   ++ SQIS PDGKS  TP SQ+GFRDPAS+G
Sbjct: 978  FVNSESNTYTESEIDLKRRGTFLNLNSQISQEMSQISGPDGKSGPTPLSQMGFRDPASMG 1037

Query: 231  GGQQLTMFSIEVQAQSKGDSRPDPRLDAINFIVLVIFEDDNLMTETHVLLRSDTVPARRN 52
             GQQLT+ SIEV A+S+GD RPDPR D++N I LV+  DD+ + E  VLL S     +RN
Sbjct: 1038 AGQQLTVLSIEVHAESRGDLRPDPRFDSVNVIALVVQNDDSFVAEVFVLLVSPDSIDQRN 1097

Query: 51   LDGISACKILVFSEEKE 1
            +DG+S CK  VF EE++
Sbjct: 1098 VDGLSGCKFSVFLEERQ 1114


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
           gi|223548348|gb|EEF49839.1| DNA polymerase zeta
           catalytic subunit, putative [Ricinus communis]
          Length = 2066

 Score =  159 bits (403), Expect = 7e-37
 Identities = 108/269 (40%), Positives = 141/269 (52%), Gaps = 14/269 (5%)
 Frame = -1

Query: 771 DKVIDDCPSFFVRDFPERKDQNAKSIAE-DFNHHQKVDMGVPAHFHSDSSS-YILTPAIS 598
           +K + +   FF  D  E+K    K++   + N  Q+  MGVP H+ +D S  Y+LTP  S
Sbjct: 146 EKALGELLPFFEGDCQEKKVVQNKALPNTNSNDQQEAIMGVPTHYQNDGSLLYLLTPIYS 205

Query: 597 PPSADSVDRWLSQDDPGSLGIL----IKSHGSLAAARKDPMLDSGLLPQDDTIIAQVKQQ 430
           PPSAD V RWL  D+   L  +      SH S      +  ++   +     I  QV+Q+
Sbjct: 206 PPSADCVYRWLRCDNEDVLLSIGSPETGSHDSSRVYGDNISMELRSVSNVRLIEDQVQQE 265

Query: 429 --------FKGSHNAGLRPLHSDSTKISENEVTTSFIKQDTCFFEDTSQISAPDGKSKST 274
                   F  + +   RPLH        N  T   I        D SQIS P+ +S+ T
Sbjct: 266 EHQIINSEFHPNTDELQRPLHHKENNAKLNACTECSI--------DLSQISGPNERSRPT 317

Query: 273 PPSQIGFRDPASVGGGQQLTMFSIEVQAQSKGDSRPDPRLDAINFIVLVIFEDDNLMTET 94
           P SQIGFRDPAS G GQQLTM SIEVQA+S+GD RPDPR DAIN + L    D++   E 
Sbjct: 318 PLSQIGFRDPASTGAGQQLTMLSIEVQAESRGDLRPDPRFDAINTVALAFQNDNDSTVEV 377

Query: 93  HVLLRSDTVPARRNLDGISACKILVFSEE 7
            VLL S+     R+ DG+S  K+L FSEE
Sbjct: 378 QVLLHSNKESYARSSDGLSVNKVLYFSEE 406


>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
            [Arabidopsis thaliana]
          Length = 1894

 Score =  158 bits (400), Expect = 2e-36
 Identities = 105/266 (39%), Positives = 148/266 (55%), Gaps = 13/266 (4%)
 Frame = -1

Query: 759  DDCPSFFVRDFPERKDQNAKSIAEDFNHHQKVDMGVPAHFHSDSSS-YILTPAISPPSAD 583
            +D P F + D  E K           +  Q   +G+P H  +D S+ Y+LTPA SPPS D
Sbjct: 866  NDIPFFPLEDNKEEKK----------HFFQGTSLGIPLHHLNDGSNLYLLTPAFSPPSVD 915

Query: 582  SVDRWLSQDDPGSLGI------LIKSHGSLAAARKDPMLDSGLLPQDDTIIAQVKQQFKG 421
            SV +W+S +D G   I      L  +H    A+  D    S ++    ++   V+Q    
Sbjct: 916  SVLQWIS-NDKGDSNIDSEKQPLRDNHNDRGASFTDLASASNVV----SVSEHVEQ---- 966

Query: 420  SHNAGLRPLHSDSTKISENEV------TTSFIKQDTCFFEDTSQISAPDGKSKSTPPSQI 259
             HN     ++S+S   +E+E+      T   +       ++ SQIS PDGKS  TP SQ+
Sbjct: 967  -HNNLF--VNSESNAYTESEIDLKPKGTFLNLNLQASVSQELSQISGPDGKSGPTPLSQM 1023

Query: 258  GFRDPASVGGGQQLTMFSIEVQAQSKGDSRPDPRLDAINFIVLVIFEDDNLMTETHVLLR 79
            GFRDPAS+G GQQLT+ SIEV A+S+GD RPDPR D++N I LV+  DD+ + E  VLL 
Sbjct: 1024 GFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIALVVQNDDSFVAEVFVLLF 1083

Query: 78   SDTVPARRNLDGISACKILVFSEEKE 1
            S     +RN+DG+S CK+ VF EE++
Sbjct: 1084 SPDSIDQRNVDGLSGCKLSVFLEERQ 1109


Top