BLASTX nr result

ID: Angelica22_contig00026467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00026467
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525469.1| pentatricopeptide repeat-containing protein,...   302   1e-79
ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi...   300   5e-79
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ...   297   3e-78
ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...   292   8e-77
ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containi...   290   5e-76

>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  302 bits (773), Expect = 1e-79
 Identities = 140/202 (69%), Positives = 173/202 (85%)
 Frame = +1

Query: 433  QLGSRDEDFMRNVGVIMNILLAPRSSCLVVKDKLEQCSVIVSTDLVVEVLSRIRNDWEVA 612
            QL  +DE  +++V +IM+IL     + + +K+K+E C V VS +LV+EVLSRIRNDWE A
Sbjct: 85   QLNLKDEGLVQDVTIIMSILHQLSGNPVEMKNKIEHCGVKVSRELVLEVLSRIRNDWEAA 144

Query: 613  FTFFTWAGRQSGYAHSLRAYHSMISILGKMRRFDTAWGLIEEMKGGNTGPSLVTPHTLLI 792
            FTFF WAGRQ GY+HS+R YH+MISILGKMR+FDTAW LI+EM+G  TG SLVTP TLLI
Sbjct: 145  FTFFLWAGRQLGYSHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLI 204

Query: 793  MIRRYCAVHDVGKAINTFYAHKRFKFEIGMEEFQNLLSALCRYKNIKDAEHLLFCNKDVF 972
            MIR+YCAVHDVG+AINTFYAHKRFKF++G++EFQ+LLSALCRYKN++DAEHL+FCNKDVF
Sbjct: 205  MIRKYCAVHDVGRAINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVF 264

Query: 973  RLNTKSFNIILNGWCNIKGNSK 1038
              NTKSFNI+LNGWCN+ G+ +
Sbjct: 265  PFNTKSFNIVLNGWCNVIGSPR 286


>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
            mitochondrial-like [Vitis vinifera]
          Length = 566

 Score =  300 bits (767), Expect = 5e-79
 Identities = 141/187 (75%), Positives = 162/187 (86%)
 Frame = +1

Query: 478  IMNILLAPRSSCLVVKDKLEQCSVIVSTDLVVEVLSRIRNDWEVAFTFFTWAGRQSGYAH 657
            I++IL  P SS  +VK KLE C V  S++LVVEVLSR+RN WE AFTFF WA +Q GYAH
Sbjct: 86   IVDILQEPGSSMSLVKHKLESCGVAASSELVVEVLSRVRNHWEAAFTFFLWAAKQPGYAH 145

Query: 658  SLRAYHSMISILGKMRRFDTAWGLIEEMKGGNTGPSLVTPHTLLIMIRRYCAVHDVGKAI 837
            SLRAYHSMISILGKMR+FDTAW LI+EM+GG TG SLVTPHTL IMIRRYCAVHDVGKAI
Sbjct: 146  SLRAYHSMISILGKMRKFDTAWALIDEMRGGRTGTSLVTPHTLSIMIRRYCAVHDVGKAI 205

Query: 838  NTFYAHKRFKFEIGMEEFQNLLSALCRYKNIKDAEHLLFCNKDVFRLNTKSFNIILNGWC 1017
            NTFYAHK+FKF +G+EEFQNLLSALCRYKN++DAE LLFCN++VF  +TKSFNIILNGWC
Sbjct: 206  NTFYAHKQFKFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFNIILNGWC 265

Query: 1018 NIKGNSK 1038
            N+ G+ +
Sbjct: 266  NVIGSMR 272


>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355499595|gb|AES80798.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  297 bits (761), Expect = 3e-78
 Identities = 138/197 (70%), Positives = 166/197 (84%)
 Frame = +1

Query: 433  QLGSRDEDFMRNVGVIMNILLAPRSSCLVVKDKLEQCSVIVSTDLVVEVLSRIRNDWEVA 612
            QL  RD+ F+++V  I++I+  P S    +K KLE C+V  S++LVVEVLSR+RNDWE A
Sbjct: 89   QLHLRDDGFVKDVKTILDIIHKPGSGPYEIKQKLEDCNVKASSELVVEVLSRVRNDWEAA 148

Query: 613  FTFFTWAGRQSGYAHSLRAYHSMISILGKMRRFDTAWGLIEEMKGGNTGPSLVTPHTLLI 792
            FTFF WAG+Q GY HS+R YHSMIS+LGKMRRFDTAW L+EEM+ G TG S+VTP TLLI
Sbjct: 149  FTFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLI 208

Query: 793  MIRRYCAVHDVGKAINTFYAHKRFKFEIGMEEFQNLLSALCRYKNIKDAEHLLFCNKDVF 972
            MIR+YCAVHDVG+AINTFYA KRF F++G+ EFQ LLSALCRYKN++DAEHLLFCNK+VF
Sbjct: 209  MIRKYCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVF 268

Query: 973  RLNTKSFNIILNGWCNI 1023
             L+TKSFNIILNGWCN+
Sbjct: 269  PLDTKSFNIILNGWCNL 285


>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
            mitochondrial-like [Glycine max]
          Length = 612

 Score =  292 bits (748), Expect = 8e-77
 Identities = 138/197 (70%), Positives = 163/197 (82%)
 Frame = +1

Query: 433  QLGSRDEDFMRNVGVIMNILLAPRSSCLVVKDKLEQCSVIVSTDLVVEVLSRIRNDWEVA 612
            QL  RD+   ++V  I+ I+    S    +K KLE CS+++S +LVVEVLSR RNDWE A
Sbjct: 116  QLHLRDDGLAKDVKTILAIMHEVGSGPSQIKQKLEHCSIVLSPELVVEVLSRTRNDWEAA 175

Query: 613  FTFFTWAGRQSGYAHSLRAYHSMISILGKMRRFDTAWGLIEEMKGGNTGPSLVTPHTLLI 792
            FTFF WAG+Q GYAHS+R YHSMISILGKMR+FDTAW LIEEM+GG  G SLVTP TLLI
Sbjct: 176  FTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLI 235

Query: 793  MIRRYCAVHDVGKAINTFYAHKRFKFEIGMEEFQNLLSALCRYKNIKDAEHLLFCNKDVF 972
            MIR+YCAVHDV +AINTFYA+KRF F +G+EEF +LLSALCRYKN++DAE+LLFCNKDVF
Sbjct: 236  MIRKYCAVHDVARAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVF 295

Query: 973  RLNTKSFNIILNGWCNI 1023
             L+TKSFNIILNGWCN+
Sbjct: 296  PLDTKSFNIILNGWCNL 312


>ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
            mitochondrial-like [Cucumis sativus]
            gi|449477985|ref|XP_004155184.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g15010,
            mitochondrial-like [Cucumis sativus]
          Length = 485

 Score =  290 bits (741), Expect = 5e-76
 Identities = 141/193 (73%), Positives = 161/193 (83%), Gaps = 1/193 (0%)
 Frame = +1

Query: 448  DEDFMRNVGVIMNILLAPRSSCLV-VKDKLEQCSVIVSTDLVVEVLSRIRNDWEVAFTFF 624
            D+  +++V  IM+I    R +  + V++KLE C + VS +LVV VLSRIRNDWE AFTFF
Sbjct: 5    DKGVIKDVDAIMDIFRGFRDANRIQVRNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF 64

Query: 625  TWAGRQSGYAHSLRAYHSMISILGKMRRFDTAWGLIEEMKGGNTGPSLVTPHTLLIMIRR 804
             WAG+Q GYAHS+R YHSMISILGKMR+FDTAW LI+EM+GG  G SLVTP TLLIMIRR
Sbjct: 65   VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRR 124

Query: 805  YCAVHDVGKAINTFYAHKRFKFEIGMEEFQNLLSALCRYKNIKDAEHLLFCNKDVFRLNT 984
            YCAVHDV KAINTFYAHKRF F IG+EEFQ+LLSALCRYKN+KDAE+LLFCNKDVF  NT
Sbjct: 125  YCAVHDVAKAINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT 184

Query: 985  KSFNIILNGWCNI 1023
            KSFNIILNGWC I
Sbjct: 185  KSFNIILNGWCVI 197


Top