BLASTX nr result

ID: Angelica22_contig00026449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00026449
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus c...    59   1e-09
ref|NP_196378.1| F-box protein [Arabidopsis thaliana] gi|7526267...    56   2e-09
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    66   3e-09
gb|AAR15451.1| F-box protein [Arabidopsis arenosa]                     53   5e-09
ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub...    53   5e-09

>ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus communis]
           gi|223550115|gb|EEF51602.1| hypothetical protein
           RCOM_1501190 [Ricinus communis]
          Length = 332

 Score = 58.9 bits (141), Expect(2) = 1e-09
 Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
 Frame = -1

Query: 339 IFYMGVSQNHLHVVEVYA-CDNILNVYEM*SNYSGWFLKYVVDLSPISQVFPEMVMTPDQ 163
           + Y G S  HL+++E+Y       NV E+  +YSGWF+KY ++L  +   FPEM+ T  +
Sbjct: 193 VIYFGESGGHLNLIEIYHHAATQFNVCELAKDYSGWFVKYRIELEEVIIAFPEMIKTQFE 252

Query: 162 VYILS--------LVRRENFEEDSFLVLHI 97
             +L+        +VR E+ +E+S++VLH+
Sbjct: 253 PTVLNYYAYEIWCIVRGES-DENSYMVLHM 281



 Score = 28.5 bits (62), Expect(2) = 1e-09
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 83  PRKAIRYNLVDKCFKRIWDF 24
           P K IRYNL  K FK++ DF
Sbjct: 282 PAKIIRYNLKGKSFKKLCDF 301


>ref|NP_196378.1| F-box protein [Arabidopsis thaliana]
           gi|75262676|sp|Q9FLS0.1|FB253_ARATH RecName: Full=F-box
           protein At5g07610 gi|9759582|dbj|BAB11439.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332003802|gb|AED91185.1| F-box protein [Arabidopsis
           thaliana]
          Length = 420

 Score = 55.8 bits (133), Expect(2) = 2e-09
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
 Frame = -1

Query: 339 IFYMGVSQNHLHVVEVY-ACDNILNVYEM*SNYSGWFLKYVVDLSPISQVFPEMV----M 175
           + ++  SQ +L+ +EV     + L VYEM SN S W +KY VDL P++  FPEM+     
Sbjct: 285 LMFLDESQGNLYYIEVNNQSSSNLRVYEMESNSSSWSVKYNVDLEPLAAAFPEMIRTEYY 344

Query: 174 TPDQVYILSLVR--RENFEEDSFLVLHI 97
           T  ++Y  S++   +E  +  S+++LHI
Sbjct: 345 TDRRIYAFSVIGFVKEETDAASYILLHI 372



 Score = 30.8 bits (68), Expect(2) = 2e-09
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 83  PRKAIRYNLVDKCFKRIWDF 24
           P +A++YN +DK FK++ DF
Sbjct: 373 PNQAVKYNFIDKTFKKLCDF 392


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
 Frame = -1

Query: 327 GVSQNHLHVVEVYACDNI-LNVYEM*SNYSGWFLKYVVDLSPISQVFPEMVMTPDQVY-- 157
           G S  HLH+VE+Y       NVYEM  ++SGWF+K+ VDL+ ++  FP ++    + Y  
Sbjct: 251 GESCGHLHLVEIYESSTTQFNVYEMERDHSGWFVKFRVDLNGVALAFPGIIEGYHEEYDY 310

Query: 156 -----ILSLVRRENFEEDSFLVLHI 97
                +L +VRRE  EEDSFL LHI
Sbjct: 311 MYSFSVLCIVRREK-EEDSFLALHI 334


>gb|AAR15451.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 52.8 bits (125), Expect(2) = 5e-09
 Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
 Frame = -1

Query: 333 YMGVSQNHLHVVEVY-ACDNILNVYEM*SNYSGWFLKYVVDLSPISQVFPEMV---MTPD 166
           ++  S+ +L+ +EV     + L VYEM  N S W +KY VDL P++  FPEM+    T  
Sbjct: 289 FLDESRGNLYYIEVNDQSSSDLPVYEMERNSSSWSMKYNVDLQPLAAAFPEMITEDYTNR 348

Query: 165 QVYILSLVR--RENFEEDSFLVLHI 97
           ++Y  S++   +E  + +S+++LHI
Sbjct: 349 RIYAFSVIGFVKEETDAESYILLHI 373



 Score = 32.3 bits (72), Expect(2) = 5e-09
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 83  PRKAIRYNLVDKCFKRIWDF 24
           P KA++YN +DK FK++ DF
Sbjct: 374 PNKAVKYNFIDKTFKKLCDF 393


>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
           gi|34013883|gb|AAQ56109.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317116|gb|EFH47538.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 52.8 bits (125), Expect(2) = 5e-09
 Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
 Frame = -1

Query: 333 YMGVSQNHLHVVEVY-ACDNILNVYEM*SNYSGWFLKYVVDLSPISQVFPEMV---MTPD 166
           ++  S+ +L+ +EV     + L VYEM  N S W +KY VDL P++  FPEM+    T  
Sbjct: 289 FLDESRGNLYYIEVNDQSSSDLPVYEMERNSSSWSMKYNVDLEPLAAAFPEMITEDYTNR 348

Query: 165 QVYILSLVR--RENFEEDSFLVLHI 97
           ++Y  S++   +E  + +S+++LHI
Sbjct: 349 RIYAFSVIGFVKEETDAESYILLHI 373



 Score = 32.3 bits (72), Expect(2) = 5e-09
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 83  PRKAIRYNLVDKCFKRIWDF 24
           P KA++YN +DK FK++ DF
Sbjct: 374 PNKAVKYNFIDKTFKKLCDF 393


Top