BLASTX nr result

ID: Angelica22_contig00026407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00026407
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   120   9e-26
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   118   4e-25
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   105   3e-21
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...    87   2e-15
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub...    86   4e-15

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score =  120 bits (302), Expect = 9e-26
 Identities = 72/164 (43%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
 Frame = +1

Query: 4   LLC--DSLFNDAIYIYNPFTNYYKELPKSTQYDDQTVLCGFGHHPETXXXXXXXXXXXXX 177
           LLC  DSL+ND++YIYNPFT  YKELPKS QY DQ V+ GFG +P+T             
Sbjct: 131 LLCLSDSLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRN 190

Query: 178 XXXGDYPVRRIRMPXXXXXXXXXXXXGVNTWKNVGQVPYNVVRRSQGALFTCGRIHWLTR 357
              G    RRI  P            G   W+++G+V Y +VRR+ GAL   GR+HW++R
Sbjct: 191 GHGGYPRSRRIIYP---LSEVQILTLGCPEWRSLGKVSYRLVRRASGALVN-GRLHWISR 246

Query: 358 GVCNNVPGLIIVSFDLADEKFHEVPRPDFSSPRDGRNYQLTSLK 489
             C N P   +VSFDL DE+F EV +PD     +  NY L  L+
Sbjct: 247 -PCRNKPARRLVSFDLTDEQFREVSKPDCGG-LNRCNYHLVVLR 288


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score =  118 bits (296), Expect = 4e-25
 Identities = 70/149 (46%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
 Frame = +1

Query: 4   LLC--DSLFNDAIYIYNPFTNYYKELPKSTQYDDQTVLCGFGHHPETXXXXXXXXXXXXX 177
           LLC  DSLFND++YIYNPFT  YKELPKS QY DQ V+ GFG +P+T             
Sbjct: 130 LLCLSDSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKT-NEYKVIRIVYYR 188

Query: 178 XXXGDYP-VRRIRMPXXXXXXXXXXXXGVNTWKNVGQVPYNVVRRSQGALFTCGRIHWLT 354
              G YP  RRI  P            G   W+++G+V Y +VRR+   L   GR+HW++
Sbjct: 189 NGHGRYPRSRRIIYPLSQVQILTLGCPG---WRSLGKVSYRLVRRASETLVN-GRLHWVS 244

Query: 355 RGVCNNVPGLIIVSFDLADEKFHEVPRPD 441
           R  C N P   +VSFDL DE+F EVP+PD
Sbjct: 245 R-PCRNKPARRLVSFDLTDEQFREVPKPD 272


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  105 bits (263), Expect = 3e-21
 Identities = 61/145 (42%), Positives = 78/145 (53%)
 Frame = +1

Query: 7   LCDSLFNDAIYIYNPFTNYYKELPKSTQYDDQTVLCGFGHHPETXXXXXXXXXXXXXXXX 186
           L DSLF DA+Y++NPFT  +K+LPKS QY DQ V+ GFG+HP T                
Sbjct: 134 LADSLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVVKVVYYRNGYG 193

Query: 187 GDYPVRRIRMPXXXXXXXXXXXXGVNTWKNVGQVPYNVVRRSQGALFTCGRIHWLTRGVC 366
           G    RRI               G  TW+++G+V Y + R    AL   GR+HW+TR   
Sbjct: 194 GFSRFRRI---TCSQSEVQVLTLGSPTWRSLGKVSYQLDRWPSEALVN-GRLHWVTRP-- 247

Query: 367 NNVPGLIIVSFDLADEKFHEVPRPD 441
                  IVSFDLADE+F E+P+PD
Sbjct: 248 RRYVTRFIVSFDLADEQFREIPKPD 272


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
           gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
           protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
           unknown protein [Arabidopsis thaliana]
           gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
           [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
           At3g07870 [Arabidopsis thaliana]
           gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
           thaliana]
          Length = 417

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
 Frame = +1

Query: 4   LLC--DSLFNDAIYIYNPFTNYYKELPK-STQYDDQTVLCGFGHHPETXXXXXXXXXXXX 174
           LLC  DSL+ND++Y+YNPFT    ELP+ S +Y DQ ++ GFG H  T            
Sbjct: 126 LLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFR 185

Query: 175 XXXXGDYPVRRIR-------MPXXXXXXXXXXXXGVNTWKNVGQVPYNVVRRSQGALFTC 333
                +  + R R                        +W+++G+ PY  V+RS  AL   
Sbjct: 186 GSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVN- 244

Query: 334 GRIHWLTRGVCNNVPGLIIVSFDLADEKFHEVPRPDFSSPRDGRNYQLTSLK 489
           GR+H++TR    +VP    VSFDL DE+F E+P+PD     +  N++L +LK
Sbjct: 245 GRLHFVTRPR-RHVPDRKFVSFDLEDEEFKEIPKPDCGG-LNRTNHRLVNLK 294


>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328394|gb|EFH58813.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 415

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 59/172 (34%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
 Frame = +1

Query: 4   LLC--DSLFNDAIYIYNPFTNYYKELPK-STQYDDQTVLCGFGHHPETXXXXXXXXXXXX 174
           LLC  DSL+ND++Y+YNPFT    ELP+ S +Y DQ ++ GFG H  T            
Sbjct: 124 LLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKDYKVLKIVYFR 183

Query: 175 XXXXGDYPVRRIR-------MPXXXXXXXXXXXXGVNTWKNVGQVPYNVVRRSQGALFTC 333
                +  + R R                        +W+++G+ PY  ++RS  AL   
Sbjct: 184 GSSSSNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFMKRSSEALVN- 242

Query: 334 GRIHWLTRGVCNNVPGLIIVSFDLADEKFHEVPRPDFSSPRDGRNYQLTSLK 489
           GR+H++TR    +VP    VSFDL DE+F E+P+PD     +  N++L +LK
Sbjct: 243 GRLHFVTRPR-RHVPDRKFVSFDLEDEEFKEIPKPDCGG-LNRTNHRLVNLK 292


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