BLASTX nr result

ID: Angelica22_contig00026399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00026399
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...   259   9e-67
ref|XP_002531766.1| transcription factor, putative [Ricinus comm...   252   1e-64
ref|XP_002330570.1| high mobility group family [Populus trichoca...   241   2e-61
ref|XP_003592799.1| High mobility group protein B3 [Medicago tru...   200   5e-49
ref|XP_003621009.1| High mobility group family [Medicago truncat...   188   2e-45

>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
           gi|296090037|emb|CBI39856.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  259 bits (661), Expect = 9e-67
 Identities = 135/242 (55%), Positives = 174/242 (71%), Gaps = 6/242 (2%)
 Frame = -3

Query: 978 SFGSKFKVPTIGGTALDLHRLFVEVTSRGGIEKVVKDRKWKEVTMIFKYPSTITSASFVL 799
           SFG+KF VPT GG ALDLHRLFVEVTSRGG+EKV++DRKWKEVT +FK+P+TITSASFVL
Sbjct: 67  SFGTKFMVPTTGGKALDLHRLFVEVTSRGGLEKVIRDRKWKEVTTVFKFPTTITSASFVL 126

Query: 798 RKYYQSLLYHFEQVYYFRKKTRPVLATDSV-STIVYGSLARNLLEDSATVHHLSAGSNLE 622
           RKYY SLL+H+EQVYYFRK++ P+   D + S+ + GS    + +DSAT + L     L+
Sbjct: 127 RKYYLSLLHHYEQVYYFRKQSFPISMADPLNSSPINGSATTPVFQDSATTNDLPVSPRLQ 186

Query: 621 PGSSVIGTIDAKFDSGYIVTVNLGSEQLKGVIYHTP-TELQLSQNSNNTAAPR----RRS 457
           PG  V GTID KFD+GY+V+VNLGS+ LKGV+YH P  E  +S++SN +A P     +RS
Sbjct: 187 PGCLVTGTIDGKFDNGYLVSVNLGSDVLKGVLYHIPNNESHMSRSSNASAVPPPRNWKRS 246

Query: 456 RNRFGDPXXXXXXXXXXXXXXYAENYNKLQPMYDRQEKVMNKKIWLLWSRLTEAEKQVYH 277
           +    DP              +AENY +L+P+Y  QE+ ++KKI  LW+RLT+AEKQVY 
Sbjct: 247 QLALRDP-SRPKRSQSGYNFFFAENYARLKPLYSGQERAISKKIGFLWNRLTDAEKQVYQ 305

Query: 276 NK 271
            K
Sbjct: 306 EK 307


>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score =  252 bits (643), Expect = 1e-64
 Identities = 136/241 (56%), Positives = 167/241 (69%), Gaps = 5/241 (2%)
 Frame = -3

Query: 978 SFGSKFKVPTIGGTALDLHRLFVEVTSRGGIEKVVKDRKWKEVTMIFKYPSTITSASFVL 799
           SFG+KF VPT+GG ALDLH LFVEVTSRGG+EKVV+DRKWKEV   F +PSTITSASFVL
Sbjct: 57  SFGTKFMVPTVGGKALDLHHLFVEVTSRGGLEKVVRDRKWKEVIAAFNFPSTITSASFVL 116

Query: 798 RKYYQSLLYHFEQVYYFRKKTRPVLATDSVS-TIVYGSLARNLLEDSATVHHLSAGSNLE 622
           RKYY SLLYHFEQVY F K+   V  +D V+  +V GS       +  TV+     S L+
Sbjct: 117 RKYYLSLLYHFEQVYQFHKQVPSVSVSDDVNGNLVNGSAT----VEGVTVNQFPGSSQLQ 172

Query: 621 PGSSVIGTIDAKFDSGYIVTVNLGSEQLKGVIYHTPTELQLSQNSNNTAAPRRRSRNR-- 448
            GSSV GTID KFD+GY++TV LGSEQLKGV+YH P E  +SQ+S+N+  P RR R R  
Sbjct: 173 LGSSVNGTIDGKFDNGYLITVTLGSEQLKGVLYHIPNEFYMSQSSHNSDLPPRRHRKRSR 232

Query: 447 --FGDPXXXXXXXXXXXXXXYAENYNKLQPMYDRQEKVMNKKIWLLWSRLTEAEKQVYHN 274
               DP              +AE+Y +L+P++  QEKV++KKI LLW+ LTEAEK++Y  
Sbjct: 233 LLLRDP-SRPKSHRSGYNFFFAEHYAQLKPLHYGQEKVISKKIGLLWNNLTEAEKEIYQE 291

Query: 273 K 271
           K
Sbjct: 292 K 292


>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
           gi|222872128|gb|EEF09259.1| high mobility group family
           [Populus trichocarpa]
          Length = 316

 Score =  241 bits (616), Expect = 2e-61
 Identities = 132/242 (54%), Positives = 166/242 (68%), Gaps = 6/242 (2%)
 Frame = -3

Query: 978 SFGSKFKVPTIGGTALDLHRLFVEVTSRGGIEKVVKDRKWKEVTMIFKYPSTITSASFVL 799
           SFG+KF VPT+GG ALDLH LFVEVTSRGGIEKV+ DRKWKEV   F +P+TITSASFVL
Sbjct: 58  SFGTKFMVPTVGGKALDLHHLFVEVTSRGGIEKVITDRKWKEVITAFNFPTTITSASFVL 117

Query: 798 RKYYQSLLYHFEQVYYFRKKTRPVLATDSVS--TIVYGSLARNLLEDSATVHHLSAGSNL 625
           RK+Y SLLYHFEQVY+F K+   V  TD+++  ++V GS     LE+ A  +  S+   L
Sbjct: 118 RKHYLSLLYHFEQVYHFNKQIPLVSGTDAMNGRSLVNGSAT---LEEGAITNQFSSSQQL 174

Query: 624 EPGSSVIGTIDAKFDSGYIVTVNLGSEQLKGVIYHTPTELQLSQNSNNTAAP----RRRS 457
           + G SV G ID KFD+GY+VTVNLG+ QLKGV+YH P     SQ+S ++  P    R+RS
Sbjct: 175 QIGCSVSGIIDGKFDNGYLVTVNLGTNQLKGVLYHIPHTFHESQDSRSSDLPPRRRRKRS 234

Query: 456 RNRFGDPXXXXXXXXXXXXXXYAENYNKLQPMYDRQEKVMNKKIWLLWSRLTEAEKQVYH 277
           R    DP              + E+Y +L+P++  QEKV++KKI LLW+ LTEAEKQVY 
Sbjct: 235 RLALRDP-SQPKSNRSGYNFFFTEHYAQLKPLHHGQEKVISKKIGLLWNNLTEAEKQVYQ 293

Query: 276 NK 271
            K
Sbjct: 294 EK 295


>ref|XP_003592799.1| High mobility group protein B3 [Medicago truncatula]
           gi|355481847|gb|AES63050.1| High mobility group protein
           B3 [Medicago truncatula]
          Length = 417

 Score =  200 bits (508), Expect = 5e-49
 Identities = 120/279 (43%), Positives = 167/279 (59%), Gaps = 34/279 (12%)
 Frame = -3

Query: 972 GSKFKVPTIGGTALDLHRLFVEVTSRGGIEKVVKDRKWKEVTMIFKYPSTITSASFVLRK 793
           G+KF +P IGG  LDLHRLFVEVTSRGG EK++KDRKWKEVT++F +PST T+ASFVLRK
Sbjct: 53  GTKFMIPVIGGRELDLHRLFVEVTSRGGFEKIIKDRKWKEVTLVFNFPSTATNASFVLRK 112

Query: 792 YYQSLLYHFEQVYYFRKK-----TRPVLATDS-------------VSTIVYGSLARNLLE 667
           YY SLLYH+EQ+YYF+ +     T  VL + S              S  V  ++ + L  
Sbjct: 113 YYTSLLYHYEQIYYFKARDWTNTTSDVLQSQSSIPAPAPKMQFSHPSPQVQPAVFQQLKV 172

Query: 666 DSATVHHLSAGSNLEPGSSVIGTIDAKFDSGYIVTVNLGSEQLKGVIYHTP-------TE 508
           +SA    LS GS+   GS V+G ID KFDSGY+VTV +GSE+LKGV+Y  P       + 
Sbjct: 173 NSAPPEGLSMGSS-SAGSQVVGVIDGKFDSGYLVTVTIGSEKLKGVLYQAPQNPVLPASH 231

Query: 507 LQLSQNSNNTAAP--------RRRSRNRFGDPXXXXXXXXXXXXXXYAENYNKLQPMYDR 352
             +  N+NN  A         R++S  +  DP              +AE + +L+P++  
Sbjct: 232 HSVPANNNNVTASVGVHRRRRRKKSEMKKRDP-AHPKPNRSGYNFFFAEQHPRLKPLHRG 290

Query: 351 QEKVMNKKIWLLWSRLTEAEKQVYHNKE-*DTSRDISEV 238
           +++ +++ I  LW++L E+EK VY +K   D  R I+E+
Sbjct: 291 KDREISRTIGELWNKLPESEKAVYQDKAVKDKERYITEM 329


>ref|XP_003621009.1| High mobility group family [Medicago truncatula]
           gi|355496024|gb|AES77227.1| High mobility group family
           [Medicago truncatula]
          Length = 437

 Score =  188 bits (477), Expect = 2e-45
 Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 20/256 (7%)
 Frame = -3

Query: 978 SFGSKFKVPTIGGTALDLHRLFVEVTSRGGIEKVVKDRKWKEVTMIFKYPSTITSASFVL 799
           S G+KF VP IGG  LDL RLF+EVTSRGGIEK++K+R+WKEVT  F +PST T+ASFVL
Sbjct: 52  SMGTKFMVPIIGGKELDLCRLFIEVTSRGGIEKLMKERRWKEVTAAFSFPSTATNASFVL 111

Query: 798 RKYYQSLLYHFEQVYYFRKKTRPVLATDSV---STIVYGSLARNLLEDSATVHHL---SA 637
           RKYY SLLYH+EQ+YYFR K     ++D++   ST+   +     L+ S   H +    +
Sbjct: 112 RKYYSSLLYHYEQIYYFRSKRWTPASSDALQNQSTMSVPASITQFLQPSPGTHPVDFQKS 171

Query: 636 GSNL-------EPGSSVIGTIDAKFDSGYIVTVNLGSEQLKGVIYHTPTELQLSQNSNNT 478
           G N          GSS+ G ID KF+SGY+V+V++GSE LKGV+Y +P  ++++ N+  +
Sbjct: 172 GVNASELPQVSSSGSSLAGVIDGKFESGYLVSVSVGSETLKGVLYESPQSIKINNNNIAS 231

Query: 477 AA---PRRRSRNRFGD----PXXXXXXXXXXXXXXYAENYNKLQPMYDRQEKVMNKKIWL 319
           AA    RRR R +  +                   +AE + +L+ +    +K +++ I  
Sbjct: 232 AALGVQRRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKLLNQTMDKDISRMIGE 291

Query: 318 LWSRLTEAEKQVYHNK 271
           LW+ L E+EK VY  K
Sbjct: 292 LWNNLKESEKTVYQEK 307


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