BLASTX nr result

ID: Angelica22_contig00026362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00026362
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157008.1| PREDICTED: putative RNA polymerase II subuni...   144   1e-32
ref|XP_004152151.1| PREDICTED: putative RNA polymerase II subuni...   144   1e-32
ref|XP_003519102.1| PREDICTED: uncharacterized protein LOC100804...   141   5e-32
ref|XP_002280625.1| PREDICTED: uncharacterized protein LOC100258...   141   5e-32
emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]   141   5e-32

>ref|XP_004157008.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Cucumis sativus]
          Length = 632

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/129 (54%), Positives = 98/129 (75%)
 Frame = -2

Query: 387 MANKALVSVADTIYELQKHLFETIQTETQLHAAGSLMSKNDFKNVITERSIAKSCGYPLC 208
           MA    V + DT+Y+LQ  L+E I+ E QL AAGSLMS++D+++V+TERSIA  CGYPLC
Sbjct: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60

Query: 207 ANPLSSNHVKPKGKYHISLREHRVYDLEEMRMYCSTKCLVESQAFLGTLQEERSTVLDES 28
            + L S++ + +G+Y ISL+EH+VYDLEE   YCS+ CL+ S+AF G LQ+ER +V++  
Sbjct: 61  HSNLPSDNTR-RGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPD 119

Query: 27  KIEEILGLF 1
           K++EIL LF
Sbjct: 120 KLKEILKLF 128


>ref|XP_004152151.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Cucumis sativus]
          Length = 662

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/129 (54%), Positives = 98/129 (75%)
 Frame = -2

Query: 387 MANKALVSVADTIYELQKHLFETIQTETQLHAAGSLMSKNDFKNVITERSIAKSCGYPLC 208
           MA    V + DT+Y+LQ  L+E I+ E QL AAGSLMS++D+++V+TERSIA  CGYPLC
Sbjct: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60

Query: 207 ANPLSSNHVKPKGKYHISLREHRVYDLEEMRMYCSTKCLVESQAFLGTLQEERSTVLDES 28
            + L S++ + +G+Y ISL+EH+VYDLEE   YCS+ CL+ S+AF G LQ+ER +V++  
Sbjct: 61  HSNLPSDNTR-RGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPD 119

Query: 27  KIEEILGLF 1
           K++EIL LF
Sbjct: 120 KLKEILKLF 128


>ref|XP_003519102.1| PREDICTED: uncharacterized protein LOC100804112 [Glycine max]
          Length = 706

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/129 (53%), Positives = 93/129 (72%)
 Frame = -2

Query: 387 MANKALVSVADTIYELQKHLFETIQTETQLHAAGSLMSKNDFKNVITERSIAKSCGYPLC 208
           MA    VSV D +++LQ  L E IQ E QL AAGSLMS++D+++++TERSI   CGYPLC
Sbjct: 1   MAKDKPVSVKDAVFKLQMSLLEGIQNEDQLFAAGSLMSRSDYEDIVTERSITNMCGYPLC 60

Query: 207 ANPLSSNHVKPKGKYHISLREHRVYDLEEMRMYCSTKCLVESQAFLGTLQEERSTVLDES 28
           +N L S+  + KG+Y ISL+EH+VYDL+E  M+CS+ CLV S+ F G+LQ ER + LD  
Sbjct: 61  SNALPSDRPR-KGRYRISLKEHKVYDLQETYMFCSSNCLVSSKTFAGSLQAERCSGLDLE 119

Query: 27  KIEEILGLF 1
           K+  +L LF
Sbjct: 120 KLNNVLSLF 128


>ref|XP_002280625.1| PREDICTED: uncharacterized protein LOC100258021 [Vitis vinifera]
           gi|296089830|emb|CBI39649.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/129 (54%), Positives = 95/129 (73%)
 Frame = -2

Query: 387 MANKALVSVADTIYELQKHLFETIQTETQLHAAGSLMSKNDFKNVITERSIAKSCGYPLC 208
           MA    ++V D +++LQ  L E IQ E QL AAGSLMS++D+++V+TER+IA  CGYPLC
Sbjct: 1   MAGDQPIAVKDAVHKLQLFLLEGIQNENQLFAAGSLMSRSDYEDVVTERTIANLCGYPLC 60

Query: 207 ANPLSSNHVKPKGKYHISLREHRVYDLEEMRMYCSTKCLVESQAFLGTLQEERSTVLDES 28
           +N L S  ++ KG Y ISL+EH+VYDL E  MYCS+ C+V S++F G+LQEER +VL+  
Sbjct: 61  SNSLPSERLR-KGHYRISLKEHKVYDLHETYMYCSSGCVVNSRSFAGSLQEERCSVLNSE 119

Query: 27  KIEEILGLF 1
           +I  IL LF
Sbjct: 120 RINGILRLF 128


>emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]
          Length = 659

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/129 (54%), Positives = 95/129 (73%)
 Frame = -2

Query: 387 MANKALVSVADTIYELQKHLFETIQTETQLHAAGSLMSKNDFKNVITERSIAKSCGYPLC 208
           MA    ++V D +++LQ  L E IQ E QL AAGSLMS++D+++V+TER+IA  CGYPLC
Sbjct: 1   MAGDQPIAVKDAVHKLQLFLLEGIQNENQLFAAGSLMSRSDYEDVVTERTIANLCGYPLC 60

Query: 207 ANPLSSNHVKPKGKYHISLREHRVYDLEEMRMYCSTKCLVESQAFLGTLQEERSTVLDES 28
           +N L S  ++ KG Y ISL+EH+VYDL E  MYCS+ C+V S++F G+LQEER +VL+  
Sbjct: 61  SNSLPSERLR-KGHYRISLKEHKVYDLHETYMYCSSGCVVNSRSFAGSLQEERCSVLNSE 119

Query: 27  KIEEILGLF 1
           +I  IL LF
Sbjct: 120 RINGILRLF 128


Top