BLASTX nr result

ID: Angelica22_contig00026244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00026244
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   158   9e-37
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   158   9e-37
ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   157   1e-36
ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subun...   148   7e-34
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   142   7e-32

>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 437

 Score =  158 bits (399), Expect = 9e-37
 Identities = 73/87 (83%), Positives = 80/87 (91%)
 Frame = +2

Query: 2   RLVKQYVGATHMQLRCQAVFNDTEEFVLCIDEPSNEIVIWDALTTEKVARWPSNHNGTPC 181
           RLVKQYVGATH+QLRCQAVFNDTEEFVL IDEPSNEIVIWDALT E+VARWPSNH G P 
Sbjct: 351 RLVKQYVGATHIQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPR 410

Query: 182 CLDHSPTEAAFISCGMDRSIRFWKETM 262
            L+HSPTE+AFISCG D+SIRFWKE++
Sbjct: 411 WLEHSPTESAFISCGTDKSIRFWKESL 437


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 435

 Score =  158 bits (399), Expect = 9e-37
 Identities = 73/87 (83%), Positives = 80/87 (91%)
 Frame = +2

Query: 2   RLVKQYVGATHMQLRCQAVFNDTEEFVLCIDEPSNEIVIWDALTTEKVARWPSNHNGTPC 181
           RLVKQYVGATH+QLRCQAVFNDTEEFVL IDEPSNEIVIWDALT E+VARWPSNH G P 
Sbjct: 349 RLVKQYVGATHIQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPR 408

Query: 182 CLDHSPTEAAFISCGMDRSIRFWKETM 262
            L+HSPTE+AFISCG D+SIRFWKE++
Sbjct: 409 WLEHSPTESAFISCGTDKSIRFWKESL 435


>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score =  157 bits (398), Expect = 1e-36
 Identities = 70/86 (81%), Positives = 78/86 (90%)
 Frame = +2

Query: 2   RLVKQYVGATHMQLRCQAVFNDTEEFVLCIDEPSNEIVIWDALTTEKVARWPSNHNGTPC 181
           RLVKQY+GATH QLRCQAVFN+TEEFV+ IDEPSNEI+IWDALT EKVARWPSNHNG P 
Sbjct: 349 RLVKQYIGATHTQLRCQAVFNETEEFVISIDEPSNEIIIWDALTAEKVARWPSNHNGAPR 408

Query: 182 CLDHSPTEAAFISCGMDRSIRFWKET 259
            ++HSP EAAFISCG DRS+RFWK+T
Sbjct: 409 WIEHSPVEAAFISCGTDRSVRFWKDT 434


>ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subunit 1-like [Glycine max]
          Length = 425

 Score =  148 bits (374), Expect = 7e-34
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = +2

Query: 2   RLVKQYVGATHMQLRCQAVFNDTEEFVLCIDEPSNEIVIWDALTTEKVARWPSNHNGTPC 181
           RLVKQY+GA H QLRCQA+FN+TEEF+L IDE SNEIVIWDA+TTEKVA+WPSNH G P 
Sbjct: 339 RLVKQYLGAIHTQLRCQAIFNETEEFILSIDELSNEIVIWDAMTTEKVAKWPSNHVGAPR 398

Query: 182 CLDHSPTEAAFISCGMDRSIRFWKETM 262
            L+HSP E+AFISCG DRS+RFWKET+
Sbjct: 399 WLEHSPIESAFISCGTDRSVRFWKETV 425


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
           vinifera]
          Length = 440

 Score =  142 bits (357), Expect = 7e-32
 Identities = 66/87 (75%), Positives = 74/87 (85%)
 Frame = +2

Query: 2   RLVKQYVGATHMQLRCQAVFNDTEEFVLCIDEPSNEIVIWDALTTEKVARWPSNHNGTPC 181
           +LVKQY+GA H QLRCQAVFN+TEEFVL IDE SNEIV+WDALT E VAR PSNH G P 
Sbjct: 354 KLVKQYLGAAHTQLRCQAVFNETEEFVLSIDEQSNEIVVWDALTAEIVARLPSNHIGAPR 413

Query: 182 CLDHSPTEAAFISCGMDRSIRFWKETM 262
            L+HSPTEAAF+SCG DRS+RFWKE +
Sbjct: 414 WLEHSPTEAAFVSCGTDRSVRFWKEIL 440


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