BLASTX nr result

ID: Angelica22_contig00026039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00026039
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    82   3e-14
gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold ...    79   3e-13
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    75   4e-12
ref|XP_003607468.1| hypothetical protein MTR_4g078340 [Medicago ...    69   3e-10
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    69   5e-10

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/125 (32%), Positives = 71/125 (56%)
 Frame = -3

Query: 464 LKLNVDASVFGGENFFSIGMVLRNHQGQFV*GKTMKFEGRVSVFEAEMLGILEALLWTKE 285
           LK NVDA++F  +N F  GM +R+ +G+F+   T  +EG     EAE +G+ +A+LW  +
Sbjct: 65  LKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWLGQ 124

Query: 284 IPDQPIIIVSNSLLSVNAVNKAKQNHLELADLIEQCRDILGSRFDVSVVFIRKQANKIAH 105
           +    + +  +  L V+++     N  E   +I+ CR +L    +  + F+R+QAN +AH
Sbjct: 125 LELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRRQANVVAH 184

Query: 104 SMTRL 90
           S  R+
Sbjct: 185 SFARV 189


>gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 260

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
 Frame = -3

Query: 464 LKLNVDASVFGGENFFSIGMVLRNHQGQFV*GKTMKFEGRVSVFEAEMLGILEALLWTKE 285
           +K NV+ ++F   +    G+  R+  G F+ G +     RV+  EAE  G+LEA+     
Sbjct: 110 VKCNVECALFNNNSIMGYGLCFRDSMGHFLPGMSNYEFLRVTPSEAEATGLLEAVKLAIA 169

Query: 284 IPDQPIIIVSNSLLSVNAVNKAKQNHLELADLIEQCRDILGSRFDVSVVFIRKQANKIAH 105
              Q +I  S+  + V+AVN +   H EL D+I  C+ +L    + SV F+R+QANK+AH
Sbjct: 170 RGMQSVIFKSDCKIVVDAVNSSVNPHNELGDIIFYCKQLLSLHANFSVRFVRRQANKVAH 229

Query: 104 SMTRL----PFALISFNVISSL 51
           ++ R     P   I F+V SSL
Sbjct: 230 NIARASLSHPSPHIFFDVPSSL 251


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 47/136 (34%), Positives = 68/136 (50%)
 Frame = -3

Query: 464 LKLNVDASVFGGENFFSIGMVLRNHQGQFV*GKTMKFEGRVSVFEAEMLGILEALLWTKE 285
           +K NVD +VF        GMV+R+  G FV G      G  +V  AE +G+ EA+ W   
Sbjct: 176 VKCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLS 235

Query: 284 IPDQPIIIVSNSLLSVNAVNKAKQNHLELADLIEQCRDILGSRFDVSVVFIRKQANKIAH 105
           +    +I   ++ + V+AV     +  E   +I  CR +L    + SV FIRKQAN +AH
Sbjct: 236 LGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAH 295

Query: 104 SMTRLPFALISFNVIS 57
           S+ R       FN+ S
Sbjct: 296 SLARASHLQDGFNMFS 311


>ref|XP_003607468.1| hypothetical protein MTR_4g078340 [Medicago truncatula]
           gi|355508523|gb|AES89665.1| hypothetical protein
           MTR_4g078340 [Medicago truncatula]
          Length = 181

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
 Frame = -3

Query: 461 KLNVDASVFGGENFFSIGMVLRNHQGQFV*GKTMKFEGRVSVFEAEMLGILEALLWTKEI 282
           K N+DA+     N   IG+ +R+ +G FV  KTM +   VSV   E LG+  AL W  ++
Sbjct: 31  KCNIDAAFTSHVNCTCIGICVRDAEGTFVLAKTMTYPCTVSVDVGEALGMHSALQWLSDM 90

Query: 281 PDQPIIIVSNSLLSVNAVNKAKQNHLELADLIEQCRDILGSRF-DVSVVFIRKQANKIAH 105
               +   ++S L+ +A      +  E   +I  CR +  + F +  V F+R+QAN +AH
Sbjct: 91  QFDNVDFETDSKLTADAFLSTMNDLSEFGCIIFSCRSLFSTSFSNFRVEFVRQQANVVAH 150

Query: 104 SMTRLPFALIS-------FNVISSLFLFETL 33
           ++TR   +L S        N I +L + E L
Sbjct: 151 ALTRETTSLASPAVYFDISNCIETLIINEML 181


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/134 (30%), Positives = 65/134 (48%)
 Frame = -3

Query: 464  LKLNVDASVFGGENFFSIGMVLRNHQGQFV*GKTMKFEGRVSVFEAEMLGILEALLWTKE 285
            +K+NVD +VF  +   +IG V R+HQG+F+ G    F  +      E LG+ E L W  E
Sbjct: 672  IKINVDGAVFPDKG--AIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHE 729

Query: 284  IPDQPIIIVSNSLLSVNAVNKAKQNHLELADLIEQCRDILGSRFDVSVVFIRKQANKIAH 105
                 I++ ++ L  V A+      +     +I  C D+L    DV VV+ R+ AN  AH
Sbjct: 730  RSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAH 789

Query: 104  SMTRLPFALISFNV 63
             +     +  S ++
Sbjct: 790  CLANGACSFTSLHI 803


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