BLASTX nr result

ID: Angelica22_contig00025932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00025932
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002881657.1| At2g39480/F12L6.14 [Arabidopsis lyrata subsp...   130   9e-29
gb|AAM19777.1| At2g39480/F12L6.14 [Arabidopsis thaliana]              130   1e-28
ref|NP_181480.1| ABC transporter B family member 6 [Arabidopsis ...   130   1e-28
ref|XP_004149812.1| PREDICTED: ABC transporter B family member 2...   130   1e-28
emb|CAN75056.1| hypothetical protein VITISV_002627 [Vitis vinifera]   129   2e-28

>ref|XP_002881657.1| At2g39480/F12L6.14 [Arabidopsis lyrata subsp. lyrata]
           gi|297327496|gb|EFH57916.1| At2g39480/F12L6.14
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1407

 Score =  130 bits (328), Expect = 9e-29
 Identities = 67/115 (58%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
 Frame = +2

Query: 92  MMVSRGLFGWSPPHIQPLTXXXXXXXXXXXXXXYLDSSAAD-----AXXXXXXXXXXXXX 256
           MM+SRGLFGWSPPHIQPLT              YLD  A +     A             
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAENGGSGTAAQADDEEDMEEPE 60

Query: 257 XXXPPPAAVPFSRLFACADKLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHLLS 421
              PPPAAVPFS+LFACAD+ DWVLMVFGSVAAAAHGTAL+VYLHYFAKI+ +L+
Sbjct: 61  EMEPPPAAVPFSQLFACADRFDWVLMVFGSVAAAAHGTALIVYLHYFAKIVQVLA 115


>gb|AAM19777.1| At2g39480/F12L6.14 [Arabidopsis thaliana]
          Length = 1407

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/115 (58%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
 Frame = +2

Query: 92  MMVSRGLFGWSPPHIQPLTXXXXXXXXXXXXXXYLDSSA-----ADAXXXXXXXXXXXXX 256
           MM+SRGLFGWSPPHIQPLT              YLD  A       A             
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAEHGGTGTAAQADDEEEMEGPE 60

Query: 257 XXXPPPAAVPFSRLFACADKLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHLLS 421
              PPPAAVPFS+LFACAD+ DWVLMVFGSVAAAAHGTAL+VYLHYFAKI+ +L+
Sbjct: 61  EMEPPPAAVPFSQLFACADRFDWVLMVFGSVAAAAHGTALIVYLHYFAKIVQVLA 115


>ref|NP_181480.1| ABC transporter B family member 6 [Arabidopsis thaliana]
           gi|90101414|sp|Q8LPT1.2|AB6B_ARATH RecName: Full=ABC
           transporter B family member 6; Short=ABC transporter
           ABCB.6; Short=AtABCB6; AltName: Full=Multidrug
           resistance protein 6; AltName: Full=P-glycoprotein 6
           gi|3355477|gb|AAC27839.1| putative ABC transporter
           [Arabidopsis thaliana] gi|330254591|gb|AEC09685.1| ABC
           transporter B family member 6 [Arabidopsis thaliana]
          Length = 1407

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/115 (58%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
 Frame = +2

Query: 92  MMVSRGLFGWSPPHIQPLTXXXXXXXXXXXXXXYLDSSA-----ADAXXXXXXXXXXXXX 256
           MM+SRGLFGWSPPHIQPLT              YLD  A       A             
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAEHGGTGTAAQADDEEEMEEPE 60

Query: 257 XXXPPPAAVPFSRLFACADKLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHLLS 421
              PPPAAVPFS+LFACAD+ DWVLMVFGSVAAAAHGTAL+VYLHYFAKI+ +L+
Sbjct: 61  EMEPPPAAVPFSQLFACADRFDWVLMVFGSVAAAAHGTALIVYLHYFAKIVQVLA 115


>ref|XP_004149812.1| PREDICTED: ABC transporter B family member 20-like [Cucumis
           sativus]
          Length = 1401

 Score =  130 bits (326), Expect = 1e-28
 Identities = 66/110 (60%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
 Frame = +2

Query: 92  MMVSRGLFGWSPPHIQPLTXXXXXXXXXXXXXXYLD-SSAADAXXXXXXXXXXXXXXXXP 268
           MM+SRGLFGWSPPHIQPLT              YLD  +                    P
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGNDPTGERLEEPEEIEEPEEIEP 60

Query: 269 PPAAVPFSRLFACADKLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHLL 418
           PPAAVPFSRLFACAD+LDW LMV GS+AAAAHGTALVVYLHYFAKI+H+L
Sbjct: 61  PPAAVPFSRLFACADRLDWTLMVVGSIAAAAHGTALVVYLHYFAKIVHVL 110


>emb|CAN75056.1| hypothetical protein VITISV_002627 [Vitis vinifera]
          Length = 1036

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/112 (60%), Positives = 73/112 (65%)
 Frame = +2

Query: 92  MMVSRGLFGWSPPHIQPLTXXXXXXXXXXXXXXYLDSSAADAXXXXXXXXXXXXXXXXPP 271
           MM+SRGLFGWSPPHIQPLT              YL+ +  DA                PP
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLEPNV-DAVPVEVEEEIEEPEEIEPP 59

Query: 272 PAAVPFSRLFACADKLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHLLSPS 427
           PAAVPFSRLFACAD LDW LMV GS+AAAAHGTALVVYLHYFAKI+ LL  S
Sbjct: 60  PAAVPFSRLFACADGLDWGLMVIGSLAAAAHGTALVVYLHYFAKIVQLLDDS 111


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