BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00025788
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   452   e-125
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              426   e-117
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   426   e-117
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   426   e-117
ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108

>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  452 bits (1163), Expect = e-125
 Identities = 226/394 (57%), Positives = 289/394 (73%), Gaps = 7/394 (1%)
 Frame = -3

Query: 1164 FYILGLMGIEAMDVDSRCDESDD------LLKGLEEVELKRFLKTATQLFFKQYGLISHQ 1003
            F I  L  ++  D D   DE +D      L+K L E  LK F K A+  FF++YG ISHQ
Sbjct: 22   FDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGESFLKNFCKKASTGFFEKYGSISHQ 81

Query: 1002 LNSYNEFIRNGIQEVFDSVGEIIVKPLCDSSQYGDGEWRSASVKFGKVTFEQPKFYAGEK 823
            +NSYN+FI  GIQ VFDSVGEI V+P  D S+ GDG+W+ ASVKFGKVT E+PKF+AGEK
Sbjct: 82   INSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDWKHASVKFGKVTLERPKFWAGEK 141

Query: 822  FATDDGDCFVDMLPRHARLQNMTYAARMKVQVNFKVYREKMVRGDKSGNNDDQYIEKIVS 643
            F+   G  ++D+LPRHARLQNMTY+AR+ V+ + +VY +K+VR DK     D++++K   
Sbjct: 142  FSVGGGKEYLDLLPRHARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDRFVDKEWE 201

Query: 642  SENSTEMIMGKLPLMVKSDLCRMKGVIKGDCDFDHGGYFIINGAEKIFVAQEQSCLKRLW 463
             E   ++++G++P+MV S+LC M GV K DC+FDHGGYFI  GAEK F+AQEQ CLKRLW
Sbjct: 202  VEGKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHGGYFIAKGAEKTFIAQEQLCLKRLW 261

Query: 462  LSRNPCWIASYRHTFIRKRVHVKLVDTSKIEQ-TGGRKVLSVFFLTEMPIWILFFALGVS 286
            +S NP W+  YR    RKRV++KL +T K+E   GG K LSV+ L EMPIW+LFFALGVS
Sbjct: 262  VSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEKALSVYILAEMPIWVLFFALGVS 321

Query: 285  SDKEVVNLIDADAEDGTVVNVLRATMREADKQCENFRRRGMALSYVEKQFKTCEFPPEES 106
            SD+EVVNLID D ED T+VN+L A++ EADK CE+FR+   AL+YV++  K C+FPP+ES
Sbjct: 322  SDREVVNLIDVDIEDTTIVNILVASIHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQES 381

Query: 105  VEECIDKLLFPKLIGIKQKARFLAYMVKCLLKAY 4
            VEECI+  LFP L G KQKARFL YMVKCLL ++
Sbjct: 382  VEECINAYLFPNLSGFKQKARFLGYMVKCLLHSF 415


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  426 bits (1095), Expect = e-117
 Identities = 214/381 (56%), Positives = 282/381 (74%), Gaps = 12/381 (3%)
 Frame = -3

Query: 1107 ESDDLLKGLEEVE------LKRFLKTATQLFFKQYGLISHQLNSYNEFIRNGIQEVFDSV 946
            E DD L G  E++      LK F K     FF +YGLI HQ+NS+N+FI+NGIQ VFDS 
Sbjct: 63   EIDDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSF 122

Query: 945  GEIIVKPLCDSSQYGDGEWRSASVKFGKVTFEQPKFYAGEKFATDDGDCFVDMLPRHARL 766
            GEI V+P  D S+ G+G+WR ASV+FGKVT E+P+ +AGE     DG   ++ LPRHARL
Sbjct: 123  GEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKESLNFLPRHARL 178

Query: 765  QNMTYAARMKVQVNFKVYREKMVRGDK-SGNNDDQYIEKIVSSENSTEMIMGKLPLMVKS 589
            QNMTY++RMK QV+F+VY +K+VR DK     D++Y+EK V  E++ ++++G++P+MVKS
Sbjct: 179  QNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKS 238

Query: 588  DLCRMKGVIKGDCDFDHGGYFIINGAEKIFVAQEQSCLKRLWLSRNPCWIASYRHTFIRK 409
            +LC M GV +GDC++DHGGYF+I GAEK F+AQEQ CLKRLW+S NP W+ +YR  + RK
Sbjct: 239  ELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRK 298

Query: 408  RVHVKLVDTSKIEQTGGRKVLSVFF-LTEMPIWILFFALGVSSDKEVVNLIDADAEDGTV 232
            RV+VKL         GG KVL+V+F  TE+PIWILFFALG SSDKEVV+LID + +D  +
Sbjct: 299  RVYVKLEPPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGI 358

Query: 231  VNVLRATMREADKQCEN----FRRRGMALSYVEKQFKTCEFPPEESVEECIDKLLFPKLI 64
             N+L A++ EAD++ E     FRR+G A+S+V+K  K+C+FPP ES++ECI K LFP   
Sbjct: 359  SNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFS 418

Query: 63   GIKQKARFLAYMVKCLLKAYT 1
            G+KQKARFL YMVKCLL+AYT
Sbjct: 419  GVKQKARFLGYMVKCLLQAYT 439


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  426 bits (1095), Expect = e-117
 Identities = 214/381 (56%), Positives = 282/381 (74%), Gaps = 12/381 (3%)
 Frame = -3

Query: 1107 ESDDLLKGLEEVE------LKRFLKTATQLFFKQYGLISHQLNSYNEFIRNGIQEVFDSV 946
            E DD L G  E++      LK F K     FF +YGLI HQ+NS+N+FI+NGIQ VFDS 
Sbjct: 27   EIDDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSF 86

Query: 945  GEIIVKPLCDSSQYGDGEWRSASVKFGKVTFEQPKFYAGEKFATDDGDCFVDMLPRHARL 766
            GEI V+P  D S+ G+G+WR ASV+FGKVT E+P+ +AGE     DG   ++ LPRHARL
Sbjct: 87   GEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKESLNFLPRHARL 142

Query: 765  QNMTYAARMKVQVNFKVYREKMVRGDK-SGNNDDQYIEKIVSSENSTEMIMGKLPLMVKS 589
            QNMTY++RMK QV+F+VY +K+VR DK     D++Y+EK V  E++ ++++G++P+MVKS
Sbjct: 143  QNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKS 202

Query: 588  DLCRMKGVIKGDCDFDHGGYFIINGAEKIFVAQEQSCLKRLWLSRNPCWIASYRHTFIRK 409
            +LC M GV +GDC++DHGGYF+I GAEK F+AQEQ CLKRLW+S NP W+ +YR  + RK
Sbjct: 203  ELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRK 262

Query: 408  RVHVKLVDTSKIEQTGGRKVLSVFF-LTEMPIWILFFALGVSSDKEVVNLIDADAEDGTV 232
            RV+VKL         GG KVL+V+F  TE+PIWILFFALG SSDKEVV+LID + +D  +
Sbjct: 263  RVYVKLEPPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGI 322

Query: 231  VNVLRATMREADKQCEN----FRRRGMALSYVEKQFKTCEFPPEESVEECIDKLLFPKLI 64
             N+L A++ EAD++ E     FRR+G A+S+V+K  K+C+FPP ES++ECI K LFP   
Sbjct: 323  SNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFS 382

Query: 63   GIKQKARFLAYMVKCLLKAYT 1
            G+KQKARFL YMVKCLL+AYT
Sbjct: 383  GVKQKARFLGYMVKCLLQAYT 403


>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  426 bits (1094), Expect = e-117
 Identities = 210/390 (53%), Positives = 289/390 (74%), Gaps = 3/390 (0%)
 Frame = -3

Query: 1164 FYILGLMGIEAMDVDSRCDESD--DLLKGLEEVELKRFLKTATQLFFKQYGLISHQLNSY 991
            F + GL  ++  D D   DE D  D+ K L    L+ F K A+  FF++YG+ISHQ++SY
Sbjct: 34   FDVDGLFEVDDYDWDEDEDEDDNLDMAKELGGGFLRNFCKKASAGFFEKYGVISHQIDSY 93

Query: 990  NEFIRNGIQEVFDSVGEIIVKPLCDSSQYGDGEWRSASVKFGKVTFEQPKFYAGEKFATD 811
            N+FIR GIQ VFDSVGEI V+P  D S+ G+G+W+ ASVKFGKVT ++PKF+AGEKF+  
Sbjct: 94   NDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGDWKHASVKFGKVTLDRPKFWAGEKFSAY 153

Query: 810  DGDCFVDMLPRHARLQNMTYAARMKVQVNFKVYREKMVRGDKSGNNDDQYIEKIVSSENS 631
            +G+ ++++ PRHARLQNMTY+AR+ V+ +  V+ +K+VR DK     +Q+++K    E+ 
Sbjct: 154  NGEEYLNLWPRHARLQNMTYSARIIVETH--VFTKKLVRSDKFKTGVEQFVDKECVMEDK 211

Query: 630  TEMIMGKLPLMVKSDLCRMKGVIKGDCDFDHGGYFIINGAEKIFVAQEQSCLKRLWLSRN 451
             ++ +G++P+MV S+LC M G  + DC+FDHGGYFI+ GAEKIF+AQEQ CLKRLW+S +
Sbjct: 212  RDVFIGRIPVMVNSELCWMSGADRPDCEFDHGGYFIVKGAEKIFIAQEQICLKRLWVSNH 271

Query: 450  PCWIASYRHTFIRKRVHVKLVDTSKIEQTGGR-KVLSVFFLTEMPIWILFFALGVSSDKE 274
              W+ +YR    R RV++KL +T K E   G  K LSV+F  EMPIW+LFFALGVSSD+E
Sbjct: 272  STWMVAYRSGEKRNRVYLKLTETLKHEHIKGEAKALSVYFFAEMPIWVLFFALGVSSDRE 331

Query: 273  VVNLIDADAEDGTVVNVLRATMREADKQCENFRRRGMALSYVEKQFKTCEFPPEESVEEC 94
            VV+LID D +D  ++N+L A++ +ADK CE+FR+   AL+YV++  K+C+FPP+ESVEEC
Sbjct: 332  VVDLIDVDIKDTNIINILVASIHDADKNCEDFRKGKKALAYVDRLVKSCKFPPQESVEEC 391

Query: 93   IDKLLFPKLIGIKQKARFLAYMVKCLLKAY 4
            I + LFP L G+KQKARFL YMVKCLL +Y
Sbjct: 392  IKEYLFPNLSGLKQKARFLGYMVKCLLLSY 421


>ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|222865766|gb|EEF02897.1|
            predicted protein [Populus trichocarpa]
          Length = 1160

 Score =  398 bits (1023), Expect = e-108
 Identities = 203/380 (53%), Positives = 267/380 (70%), Gaps = 3/380 (0%)
 Frame = -3

Query: 1131 MDVDSRCDESDDL-LKGLEEVELKRFLKTATQLFFKQYGLISHQLNSYNEFIRNGIQEVF 955
            MD+D   D  D   L  L +  L+ F K A  LFF +YGLISHQ+NSYN FI +G+Q VF
Sbjct: 1    MDMDMDEDLMDTTNLNELGKETLQSFCKKAASLFFDEYGLISHQINSYNSFINSGLQRVF 60

Query: 954  DSVGEIIVKPLCDSSQYGDGEWRSASVKFGKVTFEQPKFYAGEKFATDDGDCFVDMLPRH 775
            DS GE+ V+P  DSS+  DGEWR ASV+FGKVT ++P F+ G        D   +M PRH
Sbjct: 61   DSFGEVAVEPGYDSSKQKDGEWRRASVRFGKVTLDRPSFWGGTS-----SDAEHNMFPRH 115

Query: 774  ARLQNMTYAARMKVQVNFKVYREKMVRGDKSGNNDDQYIEKIVSSENSTEMIMGKLPLMV 595
            ARLQNMTY+ARMK+ VN +VY + + R DK     D+ ++K V    + E+I+G++P+MV
Sbjct: 116  ARLQNMTYSARMKIHVNVQVYTQTVGRSDKFKTGIDKVVQKNVVHTENREIIIGRIPVMV 175

Query: 594  KSDLCRMKGVIKGDCDFDHGGYFIINGAEKIFVAQEQSCLKRLWLSRNPCWIASYRHTFI 415
            KSDLC +  V KGDCDFDHGGYF+I GAEK+F+AQEQ C+KRLW+S +  W  SY+    
Sbjct: 176  KSDLCWLTTVEKGDCDFDHGGYFLIKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEVK 235

Query: 414  RKRVHVKLVDTSKIEQ-TGGRKVLSVFFL-TEMPIWILFFALGVSSDKEVVNLIDADAED 241
            R R+ V+LV+ SK+E   G +K L V+FL TE+P+WILFFALGV SDKEV++LID  + D
Sbjct: 236  RNRLIVRLVELSKLEYIKGEKKGLCVYFLSTEIPLWILFFALGVRSDKEVIDLIDYASND 295

Query: 240  GTVVNVLRATMREADKQCENFRRRGMALSYVEKQFKTCEFPPEESVEECIDKLLFPKLIG 61
             ++VN+  A++ +AD++CE+FRR   AL YV+K  K   FPP+ES+E+ I   LFP+L  
Sbjct: 296  ASIVNIFFASIHDADEKCEHFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNS 355

Query: 60   IKQKARFLAYMVKCLLKAYT 1
             + KARFL YMVKCLL+AYT
Sbjct: 356  RRHKARFLGYMVKCLLEAYT 375