BLASTX nr result

ID: Angelica22_contig00025649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00025649
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298606.1| predicted protein [Populus trichocarpa] gi|2...   125   2e-26
ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ...   115   1e-23
emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]   115   1e-23
ref|NP_001053163.1| Os04g0490400 [Oryza sativa Japonica Group] g...   108   2e-21
gb|EAZ31182.1| hypothetical protein OsJ_15282 [Oryza sativa Japo...   108   2e-21

>ref|XP_002298606.1| predicted protein [Populus trichocarpa] gi|222845864|gb|EEE83411.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  125 bits (314), Expect = 2e-26
 Identities = 98/267 (36%), Positives = 134/267 (50%), Gaps = 4/267 (1%)
 Frame = +3

Query: 66  RVFSSFRLISSGH--SSAINTNNTVITHPGFKFITNTLQLSRGFAKLRNTQAYYDNASDD 239
           R FS+   + S H  S++++      T P F F+    Q  RGFAK +N       + DD
Sbjct: 30  RTFSNTTTLFSPHLLSNSVSHKLPSATLPSFDFLK---QSRRGFAKGKN------KSKDD 80

Query: 240 DYGGTYGAVDFGNAVKSVALSQMEAAVEALPHVLAKLPKPATKRMLA--LNRMNFKIKGV 413
             GGT   VD G  VK  A SQM+AAV AL   L KL    T R  A  L+ +  +  GV
Sbjct: 81  SAGGTVEFVDIGPTVKETANSQMDAAVVALSRELQKL---RTGRASAGMLDHIIVETDGV 137

Query: 414 ERPFKKVAAVSVLCEQTLSITPYHLNIMKDLQEAINASKLDICIPWDGYKDLTAFIYPFT 593
           + P  + A VSV+  +TLS+ PY  N +K L+ AI +S L +    DG + L A I P T
Sbjct: 138 KLPLNRSAVVSVMDAKTLSVNPYDPNTLKQLENAIVSSPLGLNPQRDGDR-LIAAIPPLT 196

Query: 594 KEARQGHSRKVIKSSEXXXXXXXXXXXXALETXXXXXXXXXXXXNLGLSVSGFTPEDAKK 773
           KE  Q   + V KS E            A++T                  S F  +DAKK
Sbjct: 197 KEHTQAMCKVVAKSCEDCRQSIRRARQKAMDTVKKAG-------------SSFPKDDAKK 243

Query: 774 LEKEVDEMTKKYIMSVQDICKSEAKKI 854
           LEKE++EMTKK++ S +D+C ++ K+I
Sbjct: 244 LEKEIEEMTKKFVKSAEDMCNNKEKEI 270


>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
           gi|296090242|emb|CBI40061.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  115 bits (289), Expect = 1e-23
 Identities = 101/277 (36%), Positives = 142/277 (51%), Gaps = 10/277 (3%)
 Frame = +3

Query: 54  MAMRRVFS--SFRLISSGHSSAI----NTNNTVITHPGFKFITNTLQLSR-GFAKLRNTQ 212
           +++RR FS  S  L+   H S I    N   +   +P      + L+ SR GFAK R ++
Sbjct: 3   ISVRRAFSYRSILLLHCRHLSHIIHSPNLTGSPSLNPSASSALDFLRESRRGFAKGRKSK 62

Query: 213 AYYDNASDDDYGGTYGAV-DFGNAVKSVALSQMEAAVEALPHVLAKLPKPATKRMLA--L 383
                  D D G T   V D G AVK  A+SQM+AAV AL   L+KL    T R  A  L
Sbjct: 63  -------DSDAGNTVEVVPDIGPAVKENAMSQMDAAVVALSRELSKL---RTGRASAGML 112

Query: 384 NRMNFKIKGVERPFKKVAAVSVLCEQTLSITPYHLNIMKDLQEAINASKLDICIPWDGYK 563
           + +  +  GV+ P  ++A VSVL  +TLS+TPY L+ +K L+ AI +S L +    DG +
Sbjct: 113 DHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIVSSPLGLNPKADGER 172

Query: 564 DLTAFIYPFTKEARQGHSRKVIKSSEXXXXXXXXXXXXALETXXXXXXXXXXXXNLGLSV 743
            L A I P TKE  Q   + V KS E            AL+              +  + 
Sbjct: 173 -LIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDM-------------IKKAG 218

Query: 744 SGFTPEDAKKLEKEVDEMTKKYIMSVQDICKSEAKKI 854
           S    + AK+LEKEVDE+TKK++ S +D+CK++ K+I
Sbjct: 219 SSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255


>emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
          Length = 258

 Score =  115 bits (289), Expect = 1e-23
 Identities = 101/277 (36%), Positives = 142/277 (51%), Gaps = 10/277 (3%)
 Frame = +3

Query: 54  MAMRRVFS--SFRLISSGHSSAI----NTNNTVITHPGFKFITNTLQLSR-GFAKLRNTQ 212
           +++RR FS  S  L+   H S I    N   +   +P      + L+ SR GFAK R ++
Sbjct: 3   ISVRRAFSYRSILLLHCRHLSHIIHSPNLTGSPSLNPSASSALDFLRESRRGFAKGRKSK 62

Query: 213 AYYDNASDDDYGGTYGAV-DFGNAVKSVALSQMEAAVEALPHVLAKLPKPATKRMLA--L 383
                  D D G T   V D G AVK  A+SQM+AAV AL   L+KL    T R  A  L
Sbjct: 63  -------DSDAGNTVEVVPDIGPAVKENAMSQMDAAVVALSRELSKL---RTGRASAGML 112

Query: 384 NRMNFKIKGVERPFKKVAAVSVLCEQTLSITPYHLNIMKDLQEAINASKLDICIPWDGYK 563
           + +  +  GV+ P  ++A VSVL  +TLS+TPY L+ +K L+ AI +S L +    DG +
Sbjct: 113 DHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIVSSPLGLNPKADGER 172

Query: 564 DLTAFIYPFTKEARQGHSRKVIKSSEXXXXXXXXXXXXALETXXXXXXXXXXXXNLGLSV 743
            L A I P TKE  Q   + V KS E            AL+              +  + 
Sbjct: 173 -LIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDX-------------IKKAG 218

Query: 744 SGFTPEDAKKLEKEVDEMTKKYIMSVQDICKSEAKKI 854
           S    + AK+LEKEVDE+TKK++ S +D+CK++ K+I
Sbjct: 219 SSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255


>ref|NP_001053163.1| Os04g0490400 [Oryza sativa Japonica Group]
           gi|21740669|emb|CAD41132.1| OSJNBa0084K20.10 [Oryza
           sativa Japonica Group] gi|38347444|emb|CAE02486.2|
           OSJNBa0076N16.8 [Oryza sativa Japonica Group]
           gi|113564734|dbj|BAF15077.1| Os04g0490400 [Oryza sativa
           Japonica Group] gi|125548818|gb|EAY94640.1| hypothetical
           protein OsI_16419 [Oryza sativa Indica Group]
           gi|215704152|dbj|BAG92992.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 260

 Score =  108 bits (271), Expect = 2e-21
 Identities = 85/229 (37%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
 Frame = +3

Query: 171 LQLSRGFAKLRNTQAYYDNASDDDYGGTY-GAVDFGNAVKSVALSQMEAAVEALPHVLAK 347
           L+  RGFAK + ++       DD  G T   A D G  VKS A  QMEAAV AL   L+K
Sbjct: 51  LEARRGFAKGKKSK-------DDGRGDTVQDAPDIGPTVKSAATQQMEAAVVALSRELSK 103

Query: 348 LPKPATKRMLALNRMNFKIKGVERPFKKVAAVSVLCEQTLSITPYHLNIMKDLQEAINAS 527
           L        + L+ +  +  GV+    ++A VSVL   TLS+ PY  + MK ++ AI +S
Sbjct: 104 LRTGRASPGM-LDHIMVETTGVKVALNRLAVVSVLDAHTLSVMPYDPSSMKSIEHAIISS 162

Query: 528 KLDICIPWDGYKDLTAFIYPFTKEARQGHSRKVIKSSEXXXXXXXXXXXXALETXXXXXX 707
            L I    DG + + A I P TKE  Q   + V KS+E            AL+T      
Sbjct: 163 PLGINPTPDGNR-IIANIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALDT------ 215

Query: 708 XXXXXXNLGLSVSGFTPEDAKKLEKEVDEMTKKYIMSVQDICKSEAKKI 854
                  +  S SG   +D K+LEKEV+E+TKK+I S  D+CK++ K+I
Sbjct: 216 -------IKKSASGMPKDDVKRLEKEVEELTKKFIKSADDMCKAKEKEI 257


>gb|EAZ31182.1| hypothetical protein OsJ_15282 [Oryza sativa Japonica Group]
          Length = 260

 Score =  108 bits (271), Expect = 2e-21
 Identities = 85/229 (37%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
 Frame = +3

Query: 171 LQLSRGFAKLRNTQAYYDNASDDDYGGTY-GAVDFGNAVKSVALSQMEAAVEALPHVLAK 347
           L+  RGFAK + ++       DD  G T   A D G  VKS A  QMEAAV AL   L+K
Sbjct: 51  LEARRGFAKGKKSK-------DDGRGDTVQDAPDIGPTVKSAATQQMEAAVVALSRELSK 103

Query: 348 LPKPATKRMLALNRMNFKIKGVERPFKKVAAVSVLCEQTLSITPYHLNIMKDLQEAINAS 527
           L        + L+ +  +  GV+    ++A VSVL   TLS+ PY  + MK ++ AI +S
Sbjct: 104 LRTGRASPGM-LDHIMVETTGVKVALNRLAVVSVLDAHTLSVMPYDPSSMKSIEHAIISS 162

Query: 528 KLDICIPWDGYKDLTAFIYPFTKEARQGHSRKVIKSSEXXXXXXXXXXXXALETXXXXXX 707
            L I    DG + + A I P TKE  Q   + V KS+E            AL+T      
Sbjct: 163 PLGINPTPDGNR-IIANIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALDT------ 215

Query: 708 XXXXXXNLGLSVSGFTPEDAKKLEKEVDEMTKKYIMSVQDICKSEAKKI 854
                  +  S SG   +D K+LEKEV+E+TKK+I S  D+CK++ K+I
Sbjct: 216 -------IKKSASGMPKDDVKRLEKEVEELTKKFIKSADDMCKAKEKEI 257


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