BLASTX nr result

ID: Angelica22_contig00025482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00025482
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   159   4e-37
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...   157   9e-37
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   145   4e-36
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   150   2e-34
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   150   2e-34

>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  159 bits (401), Expect = 4e-37
 Identities = 86/129 (66%), Positives = 99/129 (76%), Gaps = 2/129 (1%)
 Frame = -2

Query: 495 GLIKLEFLSLVSKVCTELETHLGFGDKVLAEFIIELGKNCESVDEFFSKLKDNGAELPDY 316
           GL KLE+LSLVSKVC+ELETHLGFGDK+LAEFI ELG++CE+VDEF +KLK+NGAE+PDY
Sbjct: 10  GLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLKENGAEMPDY 69

Query: 315 FVRTLLTIIHAILPPKKGKEVAKHREG-SSGK-SSFSGLNISDSKXXXXXXXXXXXXEAK 142
           FVRTLLTIIHAILPPK  KEV K  EG  SGK S F  L+I DS+            EAK
Sbjct: 70  FVRTLLTIIHAILPPKAEKEVKKDMEGDGSGKDSKFKALSIKDSRDRVKEIDKELEIEAK 129

Query: 141 ERRRGKQEE 115
           E+ R + EE
Sbjct: 130 EKSRRENEE 138


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score =  157 bits (398), Expect = 9e-37
 Identities = 85/129 (65%), Positives = 99/129 (76%), Gaps = 2/129 (1%)
 Frame = -2

Query: 495 GLIKLEFLSLVSKVCTELETHLGFGDKVLAEFIIELGKNCESVDEFFSKLKDNGAELPDY 316
           GL KLE+LSLVSKVC+ELETHLGFGDK+LAEFI ELG++C++VDEF +KLK+NGAE+PDY
Sbjct: 10  GLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCDTVDEFDAKLKENGAEMPDY 69

Query: 315 FVRTLLTIIHAILPPKKGKEVAKHREG-SSGK-SSFSGLNISDSKXXXXXXXXXXXXEAK 142
           FVRTLLTIIHAILPPK  KEV K  EG  SGK S F  L+I DS+            EAK
Sbjct: 70  FVRTLLTIIHAILPPKAEKEVKKDMEGDGSGKDSKFKALSIQDSRDRVKEIDKELEIEAK 129

Query: 141 ERRRGKQEE 115
           E+ R + EE
Sbjct: 130 EKSRRENEE 138


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  145 bits (365), Expect(2) = 4e-36
 Identities = 75/105 (71%), Positives = 85/105 (80%), Gaps = 2/105 (1%)
 Frame = -2

Query: 495 GLIKLEFLSLVSKVCTELETHLGFGDKVLAEFIIELGKNCESVDEFFSKLKDNGAELPDY 316
           GL KLE+LSLVSKVCTELETHLG GDKVLAEFI ++G+ CE+VDEF SKLK+NGAE+PDY
Sbjct: 9   GLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEMPDY 68

Query: 315 FVRTLLTIIHAILPPK-KGKEVAKHREGSSG-KSSFSGLNISDSK 187
           FVRTLLTIIHAILPPK K  +    ++G  G KS F  L I DSK
Sbjct: 69  FVRTLLTIIHAILPPKPKSDDKGMKKDGGDGKKSKFPALGIGDSK 113



 Score = 32.0 bits (71), Expect(2) = 4e-36
 Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -3

Query: 149 KPRRGGVGNKRRTVR-IGM-AIELEVGMGIEGEERRGVVRIDMAGGRGV 9
           K R+ G+G +RR  R  GM  IE+E  +G E  E RG+ R +M G RG+
Sbjct: 113 KERKAGIGAERRKKRSTGMKEIEIETEIGREMIEERGIGR-EMIGVRGI 160


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score =  150 bits (378), Expect = 2e-34
 Identities = 80/128 (62%), Positives = 95/128 (74%), Gaps = 2/128 (1%)
 Frame = -2

Query: 495 GLIKLEFLSLVSKVCTELETHLGFGDKVLAEFIIELGKNCESVDEFFSKLKDNGAELPDY 316
           GL KLE+LSLVSKVCTELETHLG GDKVLAEFI ++G+ CE+VDEF SKLK+NGAE+PDY
Sbjct: 9   GLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEMPDY 68

Query: 315 FVRTLLTIIHAILPPK-KGKEVAKHREGSSG-KSSFSGLNISDSKXXXXXXXXXXXXEAK 142
           FVRTLLTIIHAILPPK K  +    ++G  G KS F  L I DSK            E++
Sbjct: 69  FVRTLLTIIHAILPPKPKSDDKGMKKDGGDGKKSKFPALGIGDSKERVRELEREIEIESR 128

Query: 141 ERRRGKQE 118
           +RRR ++E
Sbjct: 129 DRRREEEE 136


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  150 bits (378), Expect = 2e-34
 Identities = 80/128 (62%), Positives = 95/128 (74%), Gaps = 2/128 (1%)
 Frame = -2

Query: 495 GLIKLEFLSLVSKVCTELETHLGFGDKVLAEFIIELGKNCESVDEFFSKLKDNGAELPDY 316
           GL KLE+LSLVSKVCTELETHLG GDKVLAEFI ++G+ CE+VDEF SKLK+NGAE+PDY
Sbjct: 9   GLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEMPDY 68

Query: 315 FVRTLLTIIHAILPPK-KGKEVAKHREGSSG-KSSFSGLNISDSKXXXXXXXXXXXXEAK 142
           FVRTLLTIIHAILPPK K  +    ++G  G KS F  L I DSK            E++
Sbjct: 69  FVRTLLTIIHAILPPKPKSDDKGMKKDGGDGKKSKFPALGIGDSKERVRELEREIEIESR 128

Query: 141 ERRRGKQE 118
           +RRR ++E
Sbjct: 129 DRRREEEE 136


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