BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00025439
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    67   1e-09
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    65   6e-09
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo...    64   1e-08
ref|XP_002466325.1| hypothetical protein SORBIDRAFT_01g005663 [S...    64   2e-08
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    61   1e-07

>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/68 (44%), Positives = 46/68 (67%)
 Frame = -3

Query: 260 MLILSWNCQGVGRSRTVSNLRGLIRVHRPTVVFVMETKNKKRKLERIRRTMNMPNAFYVD 81
           M  L WNC+G+G   TV  LR L + + P+V+F+MET+  K ++E +R T++  N+F V+
Sbjct: 1   MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVN 60

Query: 80  PVGQSGGL 57
             G+SGGL
Sbjct: 61  SSGRSGGL 68


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/69 (44%), Positives = 46/69 (66%)
 Frame = -3

Query: 260 MLILSWNCQGVGRSRTVSNLRGLIRVHRPTVVFVMETKNKKRKLERIRRTMNMPNAFYVD 81
           M ILSWNCQGVG + TV +LR +  ++ P V+F+ ETK ++  LE +   +   +   V+
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 80  PVGQSGGLA 54
           P+G+SGGLA
Sbjct: 61  PIGKSGGLA 69


>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
          Length = 1170

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/83 (34%), Positives = 50/83 (60%)
 Frame = -3

Query: 257 LILSWNCQGVGRSRTVSNLRGLIRVHRPTVVFVMETKNKKRKLERIRRTMNMPNAFYVDP 78
           + LSWNC+G+GR R V  L  +++ HRP VVF+ ET+  +  +E I+  + +     V+ 
Sbjct: 93  VFLSWNCRGLGRPRAVQELVCMVQTHRPKVVFLSETRQNQGFVENIKWQIGLRGCLAVNG 152

Query: 77  VGQSGGLAPWCLEFINIFVSVAN 9
           +G+ GG+A +  E +N+ +   N
Sbjct: 153 IGKGGGIALFWDESVNVTIKSYN 175


>ref|XP_002466325.1| hypothetical protein SORBIDRAFT_01g005663 [Sorghum bicolor]
           gi|241920179|gb|EER93323.1| hypothetical protein
           SORBIDRAFT_01g005663 [Sorghum bicolor]
          Length = 176

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
 Frame = -3

Query: 290 GGCPKLATRSMLILSWNCQGVGRSRTVSNLRGLIRVHRPT---VVFVMETKNKKRKLERI 120
           G  P+ AT +M +L+WNCQGVG S     +R L R+   T   V+F+ ETKN K     +
Sbjct: 1   GASPQGATDAMSLLAWNCQGVGGSLDSPKMRHLARLIMSTNAQVIFISETKNSKITRTEL 60

Query: 119 RRTMNMPNAFYVDPVGQSGGLAPWCLEFINIFVSVAN 9
               N+ NA+ +   G SGGL  W L    + VSV +
Sbjct: 61  LNKFNLDNAYTISAEGLSGGL--WLLSRDQVEVSVVD 95


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
 Frame = -3

Query: 260 MLILSWNCQGVGRSR--TVSNLRGLIRVHRPTVVFVMETKNKKRKLERIRRTMNMPNAFY 87
           M ++SWNCQG+G S+  T+  L  +   H P V+F+METKN    +  ++  +     F 
Sbjct: 1   MSLVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETKNCSNVVVDLQEWLGYERVFT 60

Query: 86  VDPVGQSGGLAPWCLEFINIFVSVANHN 3
           V+P+G SGGLA +  + ++I +  A+ N
Sbjct: 61  VNPIGLSGGLALFWKKGVDIVIKYADKN 88