BLASTX nr result

ID: Angelica22_contig00025379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00025379
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515294.1| ATP binding protein, putative [Ricinus commu...    99   5e-19
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-...    97   1e-18
emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]    97   1e-18
emb|CBI36942.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-...    92   3e-17

>ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
           gi|223545774|gb|EEF47278.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1306

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/102 (50%), Positives = 65/102 (63%), Gaps = 6/102 (5%)
 Frame = +3

Query: 78  QTQRNKPLLVIGPTQS---SPITPRRLLDD---NVVGKRVKVYWPLDKSWYEGCVKSFDK 239
           Q++  KPLLVIG T +   SP  PR + +     VV KRVKVYWPLDK+WYEGCVKS+D+
Sbjct: 73  QSKTKKPLLVIGKTPTPSPSPSMPRVMANSFGKEVVEKRVKVYWPLDKTWYEGCVKSYDE 132

Query: 240 VSGKHWVHYXXXXXXXXXXXXXXVEWIEGSVKKFRRLRKMSV 365
            SGKH V Y              +EW+E SV KF+RLR+ S+
Sbjct: 133 DSGKHLVQYDDFEEEVLDLGNEKIEWVEESVTKFKRLRRGSL 174


>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
          Length = 1297

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
 Frame = +3

Query: 78  QTQRNKPLLVIGPTQ----SSPITPRRLLDDNVVGKRVKVYWPLDKSWYEGCVKSFDKVS 245
           Q +  KPLLVIGP++    S+P+T  +   + VV +RVKVYWPLDKSWY GCVKSFD+++
Sbjct: 64  QAKLRKPLLVIGPSKTTSPSTPVTGSKSYGEEVVNRRVKVYWPLDKSWYVGCVKSFDELT 123

Query: 246 GKHWVHYXXXXXXXXXXXXXXVEWIEGSVKKFRRLRKMSV 365
           G+H V Y              +EW+E   +  RRLR+ SV
Sbjct: 124 GEHLVQYDDADEETLDLGKEKIEWVEDKGRSLRRLRRGSV 163


>emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
          Length = 1349

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
 Frame = +3

Query: 78  QTQRNKPLLVIGPTQ----SSPITPRRLLDDNVVGKRVKVYWPLDKSWYEGCVKSFDKVS 245
           Q +  KPLLVIGP++    S+P+T  +   + VV +RVKVYWPLDKSWY GCVKSFD+++
Sbjct: 72  QAKLRKPLLVIGPSKTTSPSTPVTGSKSYGEEVVNRRVKVYWPLDKSWYVGCVKSFDELT 131

Query: 246 GKHWVHYXXXXXXXXXXXXXXVEWIEGSVKKFRRLRKMSV 365
           G+H V Y              +EW+E   +  RRLR+ SV
Sbjct: 132 GEHLVQYDDADEETLDLGKEKIEWVEDKGRSLRRLRRGSV 171


>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
          Length = 1237

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
 Frame = +3

Query: 93  KPLLVIGPTQ----SSPITPRRLLDDNVVGKRVKVYWPLDKSWYEGCVKSFDKVSGKHWV 260
           KPLLVIGP++    S+P+T  +   + VV +RVKVYWPLDKSWY GCVKSFD+++G+H V
Sbjct: 39  KPLLVIGPSKTTSPSTPVTGSKSYGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLV 98

Query: 261 HYXXXXXXXXXXXXXXVEWIEGSVKKFRRLRKMSV 365
            Y              +EW+E   +  RRLR+ SV
Sbjct: 99  QYDDADEETLDLGKEKIEWVEDKGRSLRRLRRGSV 133


>ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
          Length = 1307

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 11/106 (10%)
 Frame = +3

Query: 78  QTQRNKPLLVIG----------PTQSS-PITPRRLLDDNVVGKRVKVYWPLDKSWYEGCV 224
           Q++R KPLLVIG          P  SS P    +   D V+GK++KVYWPLDK+WYEG V
Sbjct: 59  QSKRKKPLLVIGGGAPPFSSSSPGSSSLPDAEEKSHGDGVIGKKIKVYWPLDKTWYEGRV 118

Query: 225 KSFDKVSGKHWVHYXXXXXXXXXXXXXXVEWIEGSVKKFRRLRKMS 362
           K FD+ +GKH V Y              +EW+E S KKF+RLR+ S
Sbjct: 119 KMFDEKAGKHLVQYDDAEEELLVLGNEKIEWVEESAKKFKRLRRGS 164


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