BLASTX nr result

ID: Angelica22_contig00025096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00025096
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]                94   3e-17
ref|XP_003630014.1| Lsd1-like protein [Medicago truncatula] gi|3...    90   3e-16
ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3...    90   3e-16
ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3...    90   3e-16
ref|XP_002529881.1| Charged multivesicular body protein 2b-B, pu...    90   3e-16

>gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
          Length = 176

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 40/50 (80%), Positives = 43/50 (86%)
 Frame = +3

Query: 6   QVAHVNCCNCRTTLMYPYGAPSVKCAVCHCVTNVNMGNARVPIPALRPGG 155
           QVAHV C NCRTTLMYPYGAPSVKCAVCH +TN+NM N RVP+PA RP G
Sbjct: 78  QVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNINMSNGRVPVPANRPQG 127


>ref|XP_003630014.1| Lsd1-like protein [Medicago truncatula] gi|355524036|gb|AET04490.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 123

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 39/50 (78%), Positives = 42/50 (84%)
 Frame = +3

Query: 6   QVAHVNCCNCRTTLMYPYGAPSVKCAVCHCVTNVNMGNARVPIPALRPGG 155
           QVAHV C NCRTTLMYPYGAPSVKCAVCH +TN+NM N R+PIP  RP G
Sbjct: 25  QVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRLPIPGHRPHG 74


>ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 223

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 39/50 (78%), Positives = 42/50 (84%)
 Frame = +3

Query: 6   QVAHVNCCNCRTTLMYPYGAPSVKCAVCHCVTNVNMGNARVPIPALRPGG 155
           QVAHV C NCRTTLMYPYGAPSVKCAVCH +TN+NM N R+PIP  RP G
Sbjct: 125 QVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRLPIPGHRPHG 174


>ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 211

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 39/50 (78%), Positives = 42/50 (84%)
 Frame = +3

Query: 6   QVAHVNCCNCRTTLMYPYGAPSVKCAVCHCVTNVNMGNARVPIPALRPGG 155
           QVAHV C NCRTTLMYPYGAPSVKCAVCH +TN+NM N R+PIP  RP G
Sbjct: 113 QVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRLPIPGHRPHG 162


>ref|XP_002529881.1| Charged multivesicular body protein 2b-B, putative [Ricinus
           communis] gi|223530608|gb|EEF32484.1| Charged
           multivesicular body protein 2b-B, putative [Ricinus
           communis]
          Length = 405

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 38/51 (74%), Positives = 43/51 (84%)
 Frame = +3

Query: 3   GQVAHVNCCNCRTTLMYPYGAPSVKCAVCHCVTNVNMGNARVPIPALRPGG 155
           GQ AH+NC NCRTTL+YPYGAPSVKCA+CH VTNV+MGN RV +P  RP G
Sbjct: 309 GQAAHINCRNCRTTLVYPYGAPSVKCALCHYVTNVSMGNVRVALPTNRPNG 359


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