BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00025037
         (1653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519191.1| pentatricopeptide repeat-containing protein,...   620   e-175
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat...   588   e-165
ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   572   e-160
ref|NP_188314.1| pentatricopeptide repeat-containing protein [Ar...   544   e-152
ref|XP_002885175.1| pentatricopeptide repeat-containing protein ...   535   e-149

>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  620 bits (1600), Expect = e-175
 Identities = 301/469 (64%), Positives = 365/469 (77%)
 Frame = -3

Query: 1408 PIDHFYMCRILSRKDWFLLLNHELKAKRIALNPQVVISVVQNQDNPLHSLRFYIWVSNIF 1229
            PIDH Y  RILSR DWFLLLNHE KAKRI LN   V SV+QNQ+NPL+ L+FYIWVSN+ 
Sbjct: 81   PIDHHYFSRILSRHDWFLLLNHEFKAKRITLNSHSVASVLQNQENPLYPLKFYIWVSNMD 140

Query: 1228 PLLEKNQSVRGVLGNVLYRKGPVLLSKDLIEDVKNSGFRVTEDLVCILIGSWGRLGLAKY 1049
            PL  K+QSV+GVL N LYRKGPV+LS +L++D+K SG+R+ E+L+CILIGSWGRLGLAKY
Sbjct: 141  PLFAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKY 200

Query: 1048 CGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIH 869
            C ++F QIS+LGI  STRLYNAVIDALVKSNSLDLAYLKFQQM  DNC+PDRFTYNILIH
Sbjct: 201  CDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIH 260

Query: 868  GVCKVGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKRNVKP 689
            GVC+ GVVDEA+RLVKQMEG GYSPNVFTYTILIDG+ NA KVDEAFR+L+ MK R V P
Sbjct: 261  GVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSP 320

Query: 688  NDATYRSLINGAFHGLSPLNAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREAAMFL 509
            ++AT RS I+G F  ++P  AF+L  +F++RE  L  +ACD +L CLSS ++ REA   L
Sbjct: 321  SEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALL 380

Query: 508  KKSKSKGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEALYKG 329
            KK    G+ PDS+TF+  + CLIKG DL E C ILD FV+  +K GF+ YLAL++ALY  
Sbjct: 381  KKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMA 440

Query: 328  GKEEIGNRYLHQMLEYGFVANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPNLVTF 149
            GK   GN Y +QM++ G + NV SYNM+IDCFCKT+MMDKA+  F++M  KG+ PNLVTF
Sbjct: 441  GKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTF 500

Query: 148  NTLISGYCKARDVSKARXXXXXXXXXXXEPDAFTFNSVIDGLCQVYQIE 2
            NTLI GYCK  ++ K+R           +PD FTF+S+IDGLC+  QIE
Sbjct: 501  NTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIE 549



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 83/368 (22%), Positives = 145/368 (39%)
 Frame = -3

Query: 1105 EDLVCILIGSWGRLGLAKYCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQ 926
            + L+C L        +A+  G + ++   +G    +  +N  ++ L+K   L+       
Sbjct: 361  DTLLCCLSSK----NMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILD 416

Query: 925  QMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNAN 746
            +      +    TY  LI  +   G V E      QM   G   NV +Y ++ID +C  +
Sbjct: 417  RFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTS 476

Query: 745  KVDEAFRILDKMKKRNVKPNDATYRSLINGAFHGLSPLNAFQLLSDFMDREAKLPNVACD 566
             +D+A     +M+ + + PN  T+ +LI+G                            C 
Sbjct: 477  MMDKATNTFKEMQYKGIPPNLVTFNTLIDGY---------------------------CK 509

Query: 565  AILLCLSSSSLPREAAMFLKKSKSKGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDS 386
               +C S   L     M L+     G+ PD  TFSS I  L +   + +        V  
Sbjct: 510  GGEICKSRDLL----VMLLEH----GFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMW 561

Query: 385  NIKLGFNAYLALLEALYKGGKEEIGNRYLHQMLEYGFVANVYSYNMLIDCFCKTNMMDKA 206
             +      Y  L+ +L   G      + L +M   G   +V+S+N LI  FC+   ++ A
Sbjct: 562  GLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDA 621

Query: 205  SQYFQDMCGKGVTPNLVTFNTLISGYCKARDVSKARXXXXXXXXXXXEPDAFTFNSVIDG 26
             + F  M   G+ P+  T+   I  +C++   ++A+            PD+FT N ++D 
Sbjct: 622  KKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDA 681

Query: 25   LCQVYQIE 2
            L +  Q E
Sbjct: 682  LVKQDQFE 689


>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  588 bits (1517), Expect = e-165
 Identities = 291/531 (54%), Positives = 388/531 (73%), Gaps = 12/531 (2%)
 Frame = -3

Query: 1558 QLPNQNPSKITPLAPFSNQN--SGKNTQPISHFVS-----NVSIAPF--DDKNVKLKINP 1406
            QLP+ +  + +  +PF+N    S  N  P++  +       +S  P   DDK+  L + P
Sbjct: 32   QLPSNSIQRTSKQSPFNNLEAPSRGNPSPLTTPLKAPSSIQLSTPPSLADDKH-SLSLKP 90

Query: 1405 IDHFYMCRILSRKDWFLLLNHELKAKRIALNPQVVISVVQNQDNPLHSLRFYIWVSNIFP 1226
            ID  Y+ +IL  KDWFLLLNHE KAKR+ L+PQ V+S++QNQDNPL ++RFYIWVSN+ P
Sbjct: 91   IDRSYISKILLSKDWFLLLNHEFKAKRVVLSPQFVVSILQNQDNPLSAIRFYIWVSNVDP 150

Query: 1225 LLEKNQSVRGVLGNVLYRKGP---VLLSKDLIEDVKNSGFRVTEDLVCILIGSWGRLGLA 1055
            LL K Q ++GVL   L+R+GP   VLLS DL++ +K SG +VTE+L+CIL GSWGRLGLA
Sbjct: 151  LLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLA 210

Query: 1054 KYCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNIL 875
             YC +VF QI  LG+  +TRLYNAV+DAL+KSNSLDLAYLKFQQM   NC PDRFTYNIL
Sbjct: 211  NYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNIL 270

Query: 874  IHGVCKVGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKRNV 695
            IHGVC++GVVDEA+RL+KQMEG GY PNVFTYTILIDG+ NA +  EAF++L  MK+RNV
Sbjct: 271  IHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNV 330

Query: 694  KPNDATYRSLINGAFHGLSPLNAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREAAM 515
             PN+AT RSL++G F  ++P  AF+LL +F++R+  +  + CD IL CLS++S+  EA M
Sbjct: 331  VPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVM 390

Query: 514  FLKKSKSKGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEALY 335
            FL K+  +GY P SSTF+ T+ C++K LDL  TC + D+ V S +K GF+ YL L+EALY
Sbjct: 391  FLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALY 450

Query: 334  KGGKEEIGNRYLHQMLEYGFVANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPNLV 155
            K GK EIGNRY+ +++  G ++N+YSYNM+IDC CK   MD+AS+ F+D+  +G++PN+V
Sbjct: 451  KAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIV 510

Query: 154  TFNTLISGYCKARDVSKARXXXXXXXXXXXEPDAFTFNSVIDGLCQVYQIE 2
            T+NTLI G+C+  ++ KA+            PD FTFNS+IDGLCQ ++ E
Sbjct: 511  TYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHE 561



 Score =  100 bits (250), Expect = 9e-19
 Identities = 88/399 (22%), Positives = 166/399 (41%), Gaps = 41/399 (10%)
 Frame = -3

Query: 1090 ILIGSWGRLGLAKYCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVD 911
            ILI    RLG+     ++ +Q+  LG   +   Y  +ID    +     A+   Q M+  
Sbjct: 269  ILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKER 328

Query: 910  NCRPDRFTYNILIHGVCKVGVVDEAIRL----VKQMEG---------------------- 809
            N  P+  T   L+HGV +    D+A  L    V++ +G                      
Sbjct: 329  NVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEA 388

Query: 808  ---------SGYSPNVFTYTILIDGYCNANKVD--EAFRILDKMKKRNVKPNDATYRSLI 662
                      GY P+  T+ I +   C   K+D      + D   +  VKP  +TY +LI
Sbjct: 389  VMFLIKTGKEGYVPSSSTFNITLA--CVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLI 446

Query: 661  NGAFHGLSPLNAFQLLSDFMDR---EAKLPNV-ACDAILLCLSSSSLPREAAMFLKKSKS 494
               +         ++ + +MDR   +  + N+ + + ++ CL        A+   +   +
Sbjct: 447  EALYKA----GKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHN 502

Query: 493  KGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEALYKGGKEEI 314
            +G  P+  T+++ I    +  ++ +  E+L+  ++S  +     + +L++ L +  K E 
Sbjct: 503  RGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHEN 562

Query: 313  GNRYLHQMLEYGFVANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPNLVTFNTLIS 134
                  +M+E+    NV +YN+LI  FC    + +++   + M   G+ P+  +FN LI 
Sbjct: 563  AFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQ 622

Query: 133  GYCKARDVSKARXXXXXXXXXXXEPDAFTFNSVIDGLCQ 17
            GY       KA            +PD +T+ ++I  LC+
Sbjct: 623  GYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCK 661



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 4/255 (1%)
 Frame = -3

Query: 991  YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLVKQME 812
            YN VID L K  S+D A   F+ +      P+  TYN LI G C+ G +D+A  L++ + 
Sbjct: 477  YNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLL 536

Query: 811  GSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKRNVKPNDATYRSLINGAFHGLSPL 632
             S + P++FT+  LIDG C A+K + AF    +M + +V PN  TY  LI          
Sbjct: 537  ESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILI---------- 586

Query: 631  NAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREAAMFLKKSKSKGYCPDSSTFSSTI 452
             +F  + D + R   L                        L++ K  G  PD+ +F++  
Sbjct: 587  CSFCAIGD-VSRSTHL------------------------LRQMKLHGIQPDTFSFNA-- 619

Query: 451  TCLIKGLDLGETCEILDSFVDSNIKLGFN----AYLALLEALYKGGKEEIGNRYLHQMLE 284
              LI+G       +  +   DS ++LG       Y AL+++L K G+ +        M E
Sbjct: 620  --LIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKE 677

Query: 283  YGFVANVYSYNMLID 239
             G   + Y+ ++  D
Sbjct: 678  NGCTPDSYTCSLFSD 692



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 71/327 (21%), Positives = 119/327 (36%)
 Frame = -3

Query: 1003 STRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLV 824
            S+  +N  +  ++K   L +    F        +P   TY  LI  + K G ++   R +
Sbjct: 403  SSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYM 462

Query: 823  KQMEGSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKRNVKPNDATYRSLINGAFHG 644
             ++   G   N+++Y ++ID  C    +D A  +   +  R + PN  TY +LI G    
Sbjct: 463  DRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRN 522

Query: 643  LSPLNAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREAAMFLKKSKSKGYCPDSSTF 464
             +   A +LL   ++   +                                   PD  TF
Sbjct: 523  GNMDKAQELLEMLLESRFR-----------------------------------PDIFTF 547

Query: 463  SSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEALYKGGKEEIGNRYLHQMLE 284
            +S I  L +              V+ ++      Y  L+ +    G        L QM  
Sbjct: 548  NSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKL 607

Query: 283  YGFVANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPNLVTFNTLISGYCKARDVSK 104
            +G   + +S+N LI  +   N   KA + F  M   G+ P+  T+  LI   CK+    K
Sbjct: 608  HGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDK 667

Query: 103  ARXXXXXXXXXXXEPDAFTFNSVIDGL 23
            AR            PD++T +   D L
Sbjct: 668  AREIFLSMKENGCTPDSYTCSLFSDTL 694


>ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g16890, mitochondrial-like
            [Cucumis sativus]
          Length = 688

 Score =  572 bits (1474), Expect = e-160
 Identities = 286/531 (53%), Positives = 381/531 (71%), Gaps = 12/531 (2%)
 Frame = -3

Query: 1558 QLPNQNPSKITPLAPFSNQN--SGKNTQPISHFVS-----NVSIAPF--DDKNVKLKINP 1406
            QLP+ +  + +  +PF+N    S  N  P++  +       +S  P   DDK+  L + P
Sbjct: 32   QLPSNSIQRTSKQSPFNNLEAPSRGNPSPLTTPLKAPSSIQLSTPPSLADDKH-SLSLKP 90

Query: 1405 IDHFYMCRILSRKDWFLLLNHELKAKRIALNPQVVISVVQNQDNPLHSLRFYIWVSNIFP 1226
            ID  Y+ +IL  KDWFLLLNHE KAKR+ L+PQ V+S++QNQDNPL ++RFYIWVSN+ P
Sbjct: 91   IDRSYISKILLSKDWFLLLNHEFKAKRVVLSPQFVVSILQNQDNPLSAIRFYIWVSNVDP 150

Query: 1225 LLEKNQSVRGVLGNVLYRKGP---VLLSKDLIEDVKNSGFRVTEDLVCILIGSWGRLGLA 1055
            LL K Q ++GVL   L+R+GP   VLLS DL++ +K SG +VTE+L+CIL GSWGRLGLA
Sbjct: 151  LLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLA 210

Query: 1054 KYCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNIL 875
             YC +VF QI  LG+  +TRLYNAV+DAL+KSNSLDLAYLKFQQM   NC PDRFTYNIL
Sbjct: 211  NYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNIL 270

Query: 874  IHGVCKVGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKRNV 695
            IHGVC++GVVDEA+RL+KQMEG GY PNVFTYTILIDG+ NA +  E F++L  MK+RNV
Sbjct: 271  IHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNV 330

Query: 694  KPNDATYRSLINGAFHGLSPLNAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREAAM 515
             PN+AT RSL++G F  ++P  AF+LL +F++R+  +  + CD IL CLS++S+  EA M
Sbjct: 331  VPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVM 390

Query: 514  FLKKSKSKGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEALY 335
            F          P SSTF+ T+ C++K LDL  TC + D+ V S +K GF+ YL L+EALY
Sbjct: 391  F---------XPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALY 441

Query: 334  KGGKEEIGNRYLHQMLEYGFVANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPNLV 155
            K GK EIGNRY+ +++  G ++N+YSYNM+IDC CK   MD+AS+ F+D+  +G++PN+V
Sbjct: 442  KAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIV 501

Query: 154  TFNTLISGYCKARDVSKARXXXXXXXXXXXEPDAFTFNSVIDGLCQVYQIE 2
            T+NTLI G+C+  ++ KA+            PD FTFNS+IDGLCQ ++ E
Sbjct: 502  TYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHE 552



 Score =  103 bits (257), Expect = 1e-19
 Identities = 84/339 (24%), Positives = 157/339 (46%), Gaps = 7/339 (2%)
 Frame = -3

Query: 1234 IFPLLEKNQSVRG-VLGNVLY-RKGPVLLSKDLIEDVKNSGFRVTEDLVCILIGSWGRLG 1061
            +   +E+ Q +   V  N+LY      + S+ ++    +S F +T  L C+L     +L 
Sbjct: 357  LLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSSTFNIT--LACVL----KKLD 410

Query: 1060 LAKYCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYN 881
            L   C  VF+     G+      Y  +I+AL K+  +++      ++  D    + ++YN
Sbjct: 411  LKVTC-TVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYN 469

Query: 880  ILIHGVCKVGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKR 701
            ++I  +CK   +D A  + + +   G SPN+ TY  LI G+C    +D+A  +L+ + + 
Sbjct: 470  MVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLES 529

Query: 700  NVKPNDATYRSLINGAFHGLSPLNAFQLLSDFMDREAKLPNVACDAILLC-LSSSSLPRE 524
              +P+  T+ SLI+G        NAF   ++ ++ +   PNV    IL+C   +      
Sbjct: 530  RFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVP-PNVITYNILICSFCAIGDVSR 588

Query: 523  AAMFLKKSKSKGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDSNIKLGFN----AYL 356
            +   L++ K  G  PD+ +F++    LI+G       +  +   DS ++LG       Y 
Sbjct: 589  STHLLRQMKLHGIQPDTFSFNA----LIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYG 644

Query: 355  ALLEALYKGGKEEIGNRYLHQMLEYGFVANVYSYNMLID 239
            AL+++L K G+ +        M E G   + Y+ ++  D
Sbjct: 645  ALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSD 683



 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 84/390 (21%), Positives = 162/390 (41%), Gaps = 32/390 (8%)
 Frame = -3

Query: 1090 ILIGSWGRLGLAKYCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVD 911
            ILI    RLG+     ++ +Q+  LG   +   Y  +ID    +      +   Q M+  
Sbjct: 269  ILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKER 328

Query: 910  NCRPDRFTYNILIHGVCKVGVVDEAIRLVKQM--------------------------EG 809
            N  P+  T   L+HGV +    D+A  L+ +                           E 
Sbjct: 329  NVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEA 388

Query: 808  SGYSPNVFTYTILIDGYCNANKVD--EAFRILDKMKKRNVKPNDATYRSLINGAFHGLSP 635
              + P+  T+ I +   C   K+D      + D   +  VKP  +TY +LI   +     
Sbjct: 389  VMFXPSSSTFNITLA--CVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKA--- 443

Query: 634  LNAFQLLSDFMDR---EAKLPNV-ACDAILLCLSSSSLPREAAMFLKKSKSKGYCPDSST 467
                ++ + +MDR   +  + N+ + + ++ CL        A+   +   ++G  P+  T
Sbjct: 444  -GKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVT 502

Query: 466  FSSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEALYKGGKEEIGNRYLHQML 287
            +++ I    +  ++ +  E+L+  ++S  +     + +L++ L +  K E       +M+
Sbjct: 503  YNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMV 562

Query: 286  EYGFVANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPNLVTFNTLISGYCKARDVS 107
            E+    NV +YN+LI  FC    + +++   + M   G+ P+  +FN LI GY       
Sbjct: 563  EWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQ 622

Query: 106  KARXXXXXXXXXXXEPDAFTFNSVIDGLCQ 17
            KA            +PD +T+ ++I  LC+
Sbjct: 623  KAEKLFDSMLRLGIQPDNYTYGALIKSLCK 652



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 71/327 (21%), Positives = 119/327 (36%)
 Frame = -3

Query: 1003 STRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLV 824
            S+  +N  +  ++K   L +    F        +P   TY  LI  + K G ++   R +
Sbjct: 394  SSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYM 453

Query: 823  KQMEGSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKRNVKPNDATYRSLINGAFHG 644
             ++   G   N+++Y ++ID  C    +D A  +   +  R + PN  TY +LI G    
Sbjct: 454  DRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRN 513

Query: 643  LSPLNAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREAAMFLKKSKSKGYCPDSSTF 464
             +   A +LL   ++   +                                   PD  TF
Sbjct: 514  GNMDKAQELLEMLLESRFR-----------------------------------PDIFTF 538

Query: 463  SSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEALYKGGKEEIGNRYLHQMLE 284
            +S I  L +              V+ ++      Y  L+ +    G        L QM  
Sbjct: 539  NSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKL 598

Query: 283  YGFVANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPNLVTFNTLISGYCKARDVSK 104
            +G   + +S+N LI  +   N   KA + F  M   G+ P+  T+  LI   CK+    K
Sbjct: 599  HGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDK 658

Query: 103  ARXXXXXXXXXXXEPDAFTFNSVIDGL 23
            AR            PD++T +   D L
Sbjct: 659  AREIFLSMKENGCTPDSYTCSLFSDTL 685


>ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial; AltName: Full=Protein
            PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
            gi|7670019|dbj|BAA94973.1| salt-inducible protein-like
            [Arabidopsis thaliana] gi|332642359|gb|AEE75880.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 659

 Score =  544 bits (1401), Expect = e-152
 Identities = 259/470 (55%), Positives = 346/470 (73%)
 Frame = -3

Query: 1411 NPIDHFYMCRILSRKDWFLLLNHELKAKRIALNPQVVISVVQNQDNPLHSLRFYIWVSNI 1232
            NP++  Y+ +++ RKDWFL+LN E    RI LN + VISV+QNQDNPLHSLRFY+WVSN 
Sbjct: 43   NPLNQRYISQVIERKDWFLILNQEFTTHRIGLNTRFVISVLQNQDNPLHSLRFYLWVSNF 102

Query: 1231 FPLLEKNQSVRGVLGNVLYRKGPVLLSKDLIEDVKNSGFRVTEDLVCILIGSWGRLGLAK 1052
             P+  K+QS++ VLGN L+RKGP+LLS +L++++++SG+R++++L+C+LIGSWGRLGLAK
Sbjct: 103  DPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAK 162

Query: 1051 YCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILI 872
            YC  VF QIS+LG+  STRLYNAVIDALVKSNSLDLAYLKFQQM+ D C+PDRFTYNILI
Sbjct: 163  YCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILI 222

Query: 871  HGVCKVGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKRNVK 692
            HGVCK GVVDEAIRLVKQME  G  PNVFTYTILIDG+  A +VDEA + L+ M+ R + 
Sbjct: 223  HGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLN 282

Query: 691  PNDATYRSLINGAFHGLSPLNAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREAAMF 512
            PN+AT R+ ++G F  L P  AF++L  FM++++ L  V  DA+L CLS++S+ +E   F
Sbjct: 283  PNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQF 342

Query: 511  LKKSKSKGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEALYK 332
            L+K   +GY PDSSTF++ ++CL+KG DL ETC I D FV   +K GFN YL L++AL  
Sbjct: 343  LRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLN 402

Query: 331  GGKEEIGNRYLHQMLEYGFVANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPNLVT 152
              +   G+RYL QM   G +++VYSYN +IDC CK   ++ A+ +  +M  +G++PNLVT
Sbjct: 403  AQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVT 462

Query: 151  FNTLISGYCKARDVSKARXXXXXXXXXXXEPDAFTFNSVIDGLCQVYQIE 2
            FNT +SGY    DV K             +PD  TF+ +I+ LC+  +I+
Sbjct: 463  FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512



 Score =  100 bits (249), Expect = 1e-18
 Identities = 76/338 (22%), Positives = 136/338 (40%)
 Frame = -3

Query: 1060 LAKYCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYN 881
            +AK  GQ   +I   G    +  +NA +  L+K + L      F        +P    Y 
Sbjct: 335  MAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYL 394

Query: 880  ILIHGVCKVGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKR 701
            +L+  +       E  R +KQM   G   +V++Y  +ID  C A +++ A   L +M+ R
Sbjct: 395  VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454

Query: 700  NVKPNDATYRSLINGAFHGLSPLNAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREA 521
             + PN  T+ + ++G          + +  D                          ++ 
Sbjct: 455  GISPNLVTFNTFLSG----------YSVRGDV-------------------------KKV 479

Query: 520  AMFLKKSKSKGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEA 341
               L+K    G+ PD  TFS  I CL +  ++ +  +     ++  I+     Y  L+ +
Sbjct: 480  HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539

Query: 340  LYKGGKEEIGNRYLHQMLEYGFVANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPN 161
                G  +   +   +M E G   ++Y+YN  I  FCK   + KA +  + M   G+ P+
Sbjct: 540  CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599

Query: 160  LVTFNTLISGYCKARDVSKARXXXXXXXXXXXEPDAFT 47
              T++TLI    ++   S+AR            PD++T
Sbjct: 600  NFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 2/285 (0%)
 Frame = -3

Query: 1093 CILIGSWGRLGLAKYCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQV 914
            C+L G      L + C ++F+     G+      Y  ++ AL+ +          +QM V
Sbjct: 364  CLLKGH----DLVETC-RIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGV 418

Query: 913  DNCRPDRFTYNILIHGVCKVGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNANKVDE 734
            D      ++YN +I  +CK   ++ A   + +M+  G SPN+ T+   + GY     V +
Sbjct: 419  DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK 478

Query: 733  AFRILDKMKKRNVKPNDATYRSLINGAFHGLSPLNAFQLLSDFMDREAKLPNVACDAILL 554
               +L+K+     KP+  T+  +IN         +AF    + ++   + PN     IL+
Sbjct: 479  VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE-PNEITYNILI 537

Query: 553  --CLSSSSLPREAAMFLKKSKSKGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDSNI 380
              C S+    R   +F  K K  G  PD   +++TI    K   + +  E+L + +   +
Sbjct: 538  RSCCSTGDTDRSVKLF-AKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596

Query: 379  KLGFNAYLALLEALYKGGKEEIGNRYLHQMLEYGFVANVYSYNML 245
            K     Y  L++AL + G+E         +  +G V + Y+  ++
Sbjct: 597  KPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 41/167 (24%), Positives = 72/167 (43%)
 Frame = -3

Query: 1171 KGPVLLSKDLIEDVKNSGFRVTEDLVCILIGSWGRLGLAKYCGQVFEQISYLGIGLSTRL 992
            +G V     ++E +   GF+       ++I    R    K     F+++   GI  +   
Sbjct: 473  RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532

Query: 991  YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLVKQME 812
            YN +I +   +   D +   F +M+ +   PD + YN  I   CK+  V +A  L+K M 
Sbjct: 533  YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592

Query: 811  GSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKRNVKPNDATYR 671
              G  P+ FTY+ LI     + +  EA  +   +++    P+  T R
Sbjct: 593  RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKR 639


>ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297331015|gb|EFH61434.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 653

 Score =  535 bits (1378), Expect = e-149
 Identities = 255/470 (54%), Positives = 344/470 (73%)
 Frame = -3

Query: 1411 NPIDHFYMCRILSRKDWFLLLNHELKAKRIALNPQVVISVVQNQDNPLHSLRFYIWVSNI 1232
            NP++  Y+ +++ RKDWFL+LN E    RI LN + VISV+QNQDNPLHSLRFY+WVSN 
Sbjct: 37   NPLNQRYISQVIERKDWFLILNQEFTTHRIGLNIRFVISVLQNQDNPLHSLRFYLWVSNT 96

Query: 1231 FPLLEKNQSVRGVLGNVLYRKGPVLLSKDLIEDVKNSGFRVTEDLVCILIGSWGRLGLAK 1052
             P+  K+QS++ VLGN L+RKGP+LLS +L+++++ SG+R+T++L+C+LIGSWGRLGLAK
Sbjct: 97   DPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRESGYRITDELMCVLIGSWGRLGLAK 156

Query: 1051 YCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILI 872
            YC  VF QIS+LG+  STRLYNAVIDALVKSNSL+LAY+KFQQM+ D+C+PDRFTYNILI
Sbjct: 157  YCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLNLAYVKFQQMRSDDCKPDRFTYNILI 216

Query: 871  HGVCKVGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKRNVK 692
            HGVCK GVVDEAIRLVKQME  G  PNVFTYTILIDG+  A +++EA + L+ M+ R + 
Sbjct: 217  HGVCKKGVVDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGRIEEALKQLEMMQVRKLN 276

Query: 691  PNDATYRSLINGAFHGLSPLNAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREAAMF 512
            PN+AT R+L++G F  L P  AF++L  FM++ + L  VA D +L CLS++S+ +E A+F
Sbjct: 277  PNEATIRTLVHGIFRCLPPCEAFEVLLGFMEKNSILQRVAYDTVLYCLSNNSMAKETALF 336

Query: 511  LKKSKSKGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEALYK 332
            L+K+  +GY PDSSTF++ + CL+KG  L ETC I D FV    K GFN YL L++AL  
Sbjct: 337  LRKTGERGYIPDSSTFNAAMNCLLKGHHLVETCGIFDCFVSRGAKPGFNGYLVLVQALLN 396

Query: 331  GGKEEIGNRYLHQMLEYGFVANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPNLVT 152
              +   G+RYL QM   G +++VY+YN +IDC CK    + A+ +  +M  +G++PNL+T
Sbjct: 397  AQRFSAGDRYLKQMGGDGLLSSVYTYNAVIDCLCKARRTEHAAMFLTEMQDRGISPNLIT 456

Query: 151  FNTLISGYCKARDVSKARXXXXXXXXXXXEPDAFTFNSVIDGLCQVYQIE 2
            FNT +SGY    DV K              PD  TF+ +I+ LC+  +I+
Sbjct: 457  FNTFLSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRAKEIK 506



 Score = 95.5 bits (236), Expect = 4e-17
 Identities = 72/315 (22%), Positives = 124/315 (39%)
 Frame = -3

Query: 991  YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLVKQME 812
            +NA ++ L+K + L      F        +P    Y +L+  +          R +KQM 
Sbjct: 352  FNAAMNCLLKGHHLVETCGIFDCFVSRGAKPGFNGYLVLVQALLNAQRFSAGDRYLKQMG 411

Query: 811  GSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKRNVKPNDATYRSLINGAFHGLSPL 632
            G G   +V+TY  +ID  C A + + A   L +M+ R + PN  T+ + ++G        
Sbjct: 412  GDGLLSSVYTYNAVIDCLCKARRTEHAAMFLTEMQDRGISPNLITFNTFLSG-------- 463

Query: 631  NAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREAAMFLKKSKSKGYCPDSSTFSSTI 452
                                        S+    ++    ++K    G  PD  TFS  I
Sbjct: 464  ---------------------------YSAGGDVKKVHGVVEKLLEHGCNPDVITFSLII 496

Query: 451  TCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEALYKGGKEEIGNRYLHQMLEYGFV 272
             CL +  ++ +  +     ++  IK     Y  L+ +    G      +    M E G  
Sbjct: 497  NCLCRAKEIKDAFDCFKEMLEWGIKPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLS 556

Query: 271  ANVYSYNMLIDCFCKTNMMDKASQYFQDMCGKGVTPNLVTFNTLISGYCKARDVSKARXX 92
             N+Y+YN +I  FCK   + KA +  + M   G+ P+  T++TLI    ++   S+AR  
Sbjct: 557  PNLYAYNAIIQSFCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 616

Query: 91   XXXXXXXXXEPDAFT 47
                      PD++T
Sbjct: 617  FSSMERHGCVPDSYT 631



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 54/272 (19%), Positives = 110/272 (40%)
 Frame = -3

Query: 1060 LAKYCGQVFEQISYLGIGLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYN 881
            L + CG +F+     G       Y  ++ AL+ +          +QM  D      +TYN
Sbjct: 365  LVETCG-IFDCFVSRGAKPGFNGYLVLVQALLNAQRFSAGDRYLKQMGGDGLLSSVYTYN 423

Query: 880  ILIHGVCKVGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNANKVDEAFRILDKMKKR 701
             +I  +CK    + A   + +M+  G SPN+ T+   + GY     V +   +++K+ + 
Sbjct: 424  AVIDCLCKARRTEHAAMFLTEMQDRGISPNLITFNTFLSGYSAGGDVKKVHGVVEKLLEH 483

Query: 700  NVKPNDATYRSLINGAFHGLSPLNAFQLLSDFMDREAKLPNVACDAILLCLSSSSLPREA 521
               P+  T+  +IN         +AF    + ++   K   +  + ++    S+     +
Sbjct: 484  GCNPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIKPNEITYNILIRSSCSTGDTGRS 543

Query: 520  AMFLKKSKSKGYCPDSSTFSSTITCLIKGLDLGETCEILDSFVDSNIKLGFNAYLALLEA 341
                   K  G  P+   +++ I    K   + +  E+L + +   +K     Y  L++A
Sbjct: 544  VKLFANMKESGLSPNLYAYNAIIQSFCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKA 603

Query: 340  LYKGGKEEIGNRYLHQMLEYGFVANVYSYNML 245
            L + G+E         M  +G V + Y+  ++
Sbjct: 604  LSESGRESEAREMFSSMERHGCVPDSYTKRLV 635