BLASTX nr result

ID: Angelica22_contig00024975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024975
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein lig...   128   4e-28
emb|CBI30594.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_004134950.1| PREDICTED: putative E3 ubiquitin-protein lig...   124   1e-26

>ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
           vinifera]
          Length = 534

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/126 (51%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
 Frame = -2

Query: 376 PQAPNHTHTMPA-QKRSVNSPAASDEDXXXXXXNDSPVEINQDAEELPQGEQXXXXXXXX 200
           P +P + H +P   +R ++    + +        D     + +  E P+           
Sbjct: 81  PPSPTYVHRLPPLPEREISVSMPAQKRAFDAMEGDPLQRHHGNHHEPPEDGDGYESDRSP 140

Query: 199 XXXXGEKDEYITVALADIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNEC 20
               GEKDE++ V LA+IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNEC
Sbjct: 141 SWSNGEKDEFVIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNEC 200

Query: 19  PACRTH 2
           PACRTH
Sbjct: 201 PACRTH 206


>emb|CBI30594.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = -2

Query: 184 EKDEYITVALADIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 5
           EKDE++ V LA+IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRT
Sbjct: 45  EKDEFVIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 104

Query: 4   H 2
           H
Sbjct: 105 H 105


>ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|222870857|gb|EEF07988.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  126 bits (316), Expect = 2e-27
 Identities = 66/123 (53%), Positives = 76/123 (61%), Gaps = 7/123 (5%)
 Frame = -2

Query: 349 MPAQKRSVNSPAASDEDXXXXXXNDSPVEINQDAEELPQ-------GEQXXXXXXXXXXX 191
           MPAQKRS  +     ED             N + ++ P+       G +           
Sbjct: 1   MPAQKRSYET--LQKEDDALLRQQQDHTNNNHEQKQEPRSDIDDDGGVESDRSQPSSNIN 58

Query: 190 XGEKDEYITVALADIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPAC 11
              K+EY+ V L++IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPAC
Sbjct: 59  EDVKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPAC 118

Query: 10  RTH 2
           RTH
Sbjct: 119 RTH 121


>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  125 bits (314), Expect = 4e-27
 Identities = 68/132 (51%), Positives = 78/132 (59%), Gaps = 16/132 (12%)
 Frame = -2

Query: 349 MPAQKRSVNSPAASDEDXXXXXXND----SPVEINQDAEELPQG------------EQXX 218
           MPAQKRS  +    D+D       D    +    N + ++ P              EQ  
Sbjct: 1   MPAQKRSHETLQKEDDDALIQQQQDHTNNNNNNNNHEQKQQPHDDIDDDGGGGGGDEQSD 60

Query: 217 XXXXXXXXXXGEKDEYITVALADIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMR 38
                       K+EY+ V L++IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMR
Sbjct: 61  RSQSSSSINEDVKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMR 120

Query: 37  LGNNECPACRTH 2
           LGNNECPACRTH
Sbjct: 121 LGNNECPACRTH 132


>ref|XP_004134950.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Cucumis sativus] gi|449479584|ref|XP_004155643.1|
           PREDICTED: putative E3 ubiquitin-protein ligase
           RING1a-like [Cucumis sativus]
          Length = 427

 Score =  124 bits (310), Expect = 1e-26
 Identities = 68/116 (58%), Positives = 76/116 (65%)
 Frame = -2

Query: 349 MPAQKRSVNSPAASDEDXXXXXXNDSPVEINQDAEELPQGEQXXXXXXXXXXXXGEKDEY 170
           MPA+KR+ +S    D D         P   N    E  Q EQ            G++DE+
Sbjct: 1   MPARKRAYDS---LDVDLLP------PRLHNTFNNERSQDEQSQESDRSSSSSQGDEDEF 51

Query: 169 ITVALADIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 2
           I V L+DIRKEVQCPICLGII+KTRTVMECLHRFCRECIDKSMRLGN ECPACRTH
Sbjct: 52  IAVKLSDIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNKECPACRTH 107


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