BLASTX nr result

ID: Angelica22_contig00024959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024959
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi...   204   8e-51
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...   198   3e-49
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
emb|CBI16054.3| unnamed protein product [Vitis vinifera]              195   4e-48

>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  204 bits (518), Expect = 8e-51
 Identities = 96/134 (71%), Positives = 110/134 (82%)
 Frame = +1

Query: 4   GCSWIEVKKKIYSFISADELNPKNEVVLALLVKLLTEIKKMGYVPHTKAVLYDTSEEEKE 183
           GCSWIEVK+K+YSF+S DE NP+ E + ALLVKL  E+K  GYVP T  VLYD  EEEKE
Sbjct: 525 GCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKE 584

Query: 184 SILLAHSEKLALAFGLMNSNRGETIRISKNLRLCEDCHSVTKFISIFSDRVIFVRDVNRI 363
            I+L HSEKLA+AFGL+N+ +GETIRI KNLRLCEDCH+VTKFIS F++R I VRDVNR 
Sbjct: 585 RIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRF 644

Query: 364 HRFGDGVCSCGDYW 405
           H F DGVCSCGDYW
Sbjct: 645 HHFRDGVCSCGDYW 658


>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  203 bits (517), Expect = 1e-50
 Identities = 96/134 (71%), Positives = 110/134 (82%)
 Frame = +1

Query: 4   GCSWIEVKKKIYSFISADELNPKNEVVLALLVKLLTEIKKMGYVPHTKAVLYDTSEEEKE 183
           GCSWIEVK+K+YSF+S DE NP+ E + ALLVKL  E+K  GYVP T  VLYD  EEEKE
Sbjct: 525 GCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKE 584

Query: 184 SILLAHSEKLALAFGLMNSNRGETIRISKNLRLCEDCHSVTKFISIFSDRVIFVRDVNRI 363
            I+L HSEKLA+AFGL+N+ +GETIRI KNLRLCEDCH+VTKFIS F++R I VRDVNR 
Sbjct: 585 RIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRF 644

Query: 364 HRFGDGVCSCGDYW 405
           H F DGVCSCGDYW
Sbjct: 645 HHFKDGVCSCGDYW 658


>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449474033|ref|XP_004154055.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449510921|ref|XP_004163811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  198 bits (504), Expect = 3e-49
 Identities = 93/134 (69%), Positives = 110/134 (82%)
 Frame = +1

Query: 4   GCSWIEVKKKIYSFISADELNPKNEVVLALLVKLLTEIKKMGYVPHTKAVLYDTSEEEKE 183
           G SWIEV++KIYSF S DE NP+ E + ALLV L  E+K+ GY P TK VLYD  +EEKE
Sbjct: 516 GRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKE 575

Query: 184 SILLAHSEKLALAFGLMNSNRGETIRISKNLRLCEDCHSVTKFISIFSDRVIFVRDVNRI 363
            I+L HSEKLA+AFGL+N+++G+TIRI+KNLRLCEDCHSVTKFIS F+DR I VRD+NR 
Sbjct: 576 RIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRF 635

Query: 364 HRFGDGVCSCGDYW 405
           H F DGVCSCGDYW
Sbjct: 636 HHFKDGVCSCGDYW 649


>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score =  196 bits (497), Expect = 2e-48
 Identities = 93/134 (69%), Positives = 110/134 (82%)
 Frame = +1

Query: 4   GCSWIEVKKKIYSFISADELNPKNEVVLALLVKLLTEIKKMGYVPHTKAVLYDTSEEEKE 183
           G SWIEVK+KIYSF+S DE+NP+ E + ALLVKL  E+K+ GYVP TK VLYD    EKE
Sbjct: 517 GRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKE 576

Query: 184 SILLAHSEKLALAFGLMNSNRGETIRISKNLRLCEDCHSVTKFISIFSDRVIFVRDVNRI 363
            I+L HSEKLA+AFGL+NS++GE IRI+K+LRLCEDCHS TKFIS F+++ I VRDVNR 
Sbjct: 577 RIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRF 636

Query: 364 HRFGDGVCSCGDYW 405
           H F DGVCSCGDYW
Sbjct: 637 HHFRDGVCSCGDYW 650


>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  195 bits (495), Expect = 4e-48
 Identities = 95/134 (70%), Positives = 110/134 (82%)
 Frame = +1

Query: 4   GCSWIEVKKKIYSFISADELNPKNEVVLALLVKLLTEIKKMGYVPHTKAVLYDTSEEEKE 183
           G S IE+++KIYSF+S DE NP+ E + ALL+KL  E+K+ GYVP TK VLYD   EEKE
Sbjct: 335 GRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKE 394

Query: 184 SILLAHSEKLALAFGLMNSNRGETIRISKNLRLCEDCHSVTKFISIFSDRVIFVRDVNRI 363
            I+L HSEKLALAFGL+NS +GETIRI+KNLRLCEDCHSVTKFIS F++R I VRDVNR 
Sbjct: 395 RIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRF 454

Query: 364 HRFGDGVCSCGDYW 405
           H F DGVCSCGDYW
Sbjct: 455 HLFQDGVCSCGDYW 468


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