BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024941
         (1365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-...   206   e-101
emb|CBI24961.3| unnamed protein product [Vitis vinifera]              206   e-101
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,...   168   2e-81
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,...   168   2e-81
ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca...   172   7e-77

>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 426

 Score =  206 bits (523), Expect(2) = e-101
 Identities = 95/142 (66%), Positives = 124/142 (87%)
 Frame = +1

Query: 268 LSSKEEAEYILLIKEEAKLEAVRRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRES 447
           L+ +EEAE+ L +KEEA LEA RR+I ET +H+PT NQ A+ VG+ +SSLDK+LC GRES
Sbjct: 130 LTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNGRES 189

Query: 448 RERITESYKRLVISIASNYQGRGLNMQDLVQEGSIGLLRGVQKFNPERGYKLSTYVYWWI 627
           RERI +SY+RLV+SIA+ YQG+GL++QDL+QEGSIGLLRG ++F+P+RGYKLSTYVYWWI
Sbjct: 190 RERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWI 249

Query: 628 RQAILKSVASKSRTIRLPLIMC 693
           RQAI++++A+KSR IRLP  +C
Sbjct: 250 RQAIVRAIANKSRIIRLPGSIC 271



 Score =  192 bits (487), Expect(2) = e-101
 Identities = 92/158 (58%), Positives = 127/158 (80%)
 Frame = +3

Query: 696  GSVCEMIPKIAEANNNLAVKLRRSPSLEEIAESVGTTVRTVRLIYRRSKEPVSLDRALTS 875
            GS+CEM+ KIAEA   L+ +LRR P+ +EIAE +   V TVRL+  RS+ P+S+D+A+TS
Sbjct: 268  GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 327

Query: 876  QGCMNLQDIMPGPEELTPETMLIKQLRKQELEKTLNQLSDRESTIVRLHFGLNGETPRSF 1055
            QGCM LQ+I+PGP+E TP+ M+ +QL KQE+E+ LN L +RE+ I+RL+FG+NGETP SF
Sbjct: 328  QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 387

Query: 1056 EEIARVLKLSRERIRQVNGNALSKLKQNSMVDDMIVYI 1169
            EEI R++KLSRER+RQ+N  ALSKL+Q S+VD + +Y+
Sbjct: 388  EEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYM 425


>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  206 bits (523), Expect(2) = e-101
 Identities = 95/142 (66%), Positives = 124/142 (87%)
 Frame = +1

Query: 268 LSSKEEAEYILLIKEEAKLEAVRRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRES 447
           L+ +EEAE+ L +KEEA LEA RR+I ET +H+PT NQ A+ VG+ +SSLDK+LC GRES
Sbjct: 23  LTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNGRES 82

Query: 448 RERITESYKRLVISIASNYQGRGLNMQDLVQEGSIGLLRGVQKFNPERGYKLSTYVYWWI 627
           RERI +SY+RLV+SIA+ YQG+GL++QDL+QEGSIGLLRG ++F+P+RGYKLSTYVYWWI
Sbjct: 83  RERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWI 142

Query: 628 RQAILKSVASKSRTIRLPLIMC 693
           RQAI++++A+KSR IRLP  +C
Sbjct: 143 RQAIVRAIANKSRIIRLPGSIC 164



 Score =  192 bits (487), Expect(2) = e-101
 Identities = 92/158 (58%), Positives = 127/158 (80%)
 Frame = +3

Query: 696  GSVCEMIPKIAEANNNLAVKLRRSPSLEEIAESVGTTVRTVRLIYRRSKEPVSLDRALTS 875
            GS+CEM+ KIAEA   L+ +LRR P+ +EIAE +   V TVRL+  RS+ P+S+D+A+TS
Sbjct: 161  GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 220

Query: 876  QGCMNLQDIMPGPEELTPETMLIKQLRKQELEKTLNQLSDRESTIVRLHFGLNGETPRSF 1055
            QGCM LQ+I+PGP+E TP+ M+ +QL KQE+E+ LN L +RE+ I+RL+FG+NGETP SF
Sbjct: 221  QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 280

Query: 1056 EEIARVLKLSRERIRQVNGNALSKLKQNSMVDDMIVYI 1169
            EEI R++KLSRER+RQ+N  ALSKL+Q S+VD + +Y+
Sbjct: 281  EEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYM 318


>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Cucumis sativus]
          Length = 436

 Score =  168 bits (425), Expect(2) = 2e-81
 Identities = 90/188 (47%), Positives = 120/188 (63%)
 Frame = +1

Query: 118 WKEVERDWKEGVGVXXXXXXXXXSCEVEKEGCAEIRHIFSRSKTKRAGHHLSSKEEAEYI 297
           WK+  R  ++ VGV                  AE   I   S   R G+ LS KEEAE  
Sbjct: 108 WKKKRRKRRKEVGVK-----------------AEENWIALSSGPLRPGY-LSPKEEAELC 149

Query: 298 LLIKEEAKLEAVRRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRESRERITESYKR 477
           L +KE   LE V+ +I+ET +H+PT  QLA  +G     +D+ILC  RESR+R+   Y +
Sbjct: 150 LCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSK 209

Query: 478 LVISIASNYQGRGLNMQDLVQEGSIGLLRGVQKFNPERGYKLSTYVYWWIRQAILKSVAS 657
           LVISIA+ YQG+GL++QDL QEG+IGLL+G ++F P RG+KLSTY YWWIRQAI++++  
Sbjct: 210 LVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK 269

Query: 658 KSRTIRLP 681
           KSR +RLP
Sbjct: 270 KSRLVRLP 277



 Score =  162 bits (410), Expect(2) = 2e-81
 Identities = 78/158 (49%), Positives = 116/158 (73%)
 Frame = +3

Query: 696  GSVCEMIPKIAEANNNLAVKLRRSPSLEEIAESVGTTVRTVRLIYRRSKEPVSLDRALTS 875
            G + +M+ +IAE NN+L +KL R P+ +E+AES+   + T+RL+  RSK P+S+++ +  
Sbjct: 278  GHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVND 337

Query: 876  QGCMNLQDIMPGPEELTPETMLIKQLRKQELEKTLNQLSDRESTIVRLHFGLNGETPRSF 1055
            + C+ LQ+IMPGP+ LTPE M++++L KQEL++ LN LS RE+ I+ L+FGLNGE P+SF
Sbjct: 338  RSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSF 397

Query: 1056 EEIARVLKLSRERIRQVNGNALSKLKQNSMVDDMIVYI 1169
            EEI + L LSRE IRQ N   LSKLK+  ++D +  Y+
Sbjct: 398  EEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDYL 435


>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Cucumis sativus]
          Length = 341

 Score =  168 bits (425), Expect(2) = 2e-81
 Identities = 90/188 (47%), Positives = 120/188 (63%)
 Frame = +1

Query: 118 WKEVERDWKEGVGVXXXXXXXXXSCEVEKEGCAEIRHIFSRSKTKRAGHHLSSKEEAEYI 297
           WK+  R  ++ VGV                  AE   I   S   R G+ LS KEEAE  
Sbjct: 13  WKKKRRKRRKEVGVK-----------------AEENWIALSSGPLRPGY-LSPKEEAELC 54

Query: 298 LLIKEEAKLEAVRRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRESRERITESYKR 477
           L +KE   LE V+ +I+ET +H+PT  QLA  +G     +D+ILC  RESR+R+   Y +
Sbjct: 55  LCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSK 114

Query: 478 LVISIASNYQGRGLNMQDLVQEGSIGLLRGVQKFNPERGYKLSTYVYWWIRQAILKSVAS 657
           LVISIA+ YQG+GL++QDL QEG+IGLL+G ++F P RG+KLSTY YWWIRQAI++++  
Sbjct: 115 LVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK 174

Query: 658 KSRTIRLP 681
           KSR +RLP
Sbjct: 175 KSRLVRLP 182



 Score =  162 bits (410), Expect(2) = 2e-81
 Identities = 78/158 (49%), Positives = 116/158 (73%)
 Frame = +3

Query: 696  GSVCEMIPKIAEANNNLAVKLRRSPSLEEIAESVGTTVRTVRLIYRRSKEPVSLDRALTS 875
            G + +M+ +IAE NN+L +KL R P+ +E+AES+   + T+RL+  RSK P+S+++ +  
Sbjct: 183  GHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVND 242

Query: 876  QGCMNLQDIMPGPEELTPETMLIKQLRKQELEKTLNQLSDRESTIVRLHFGLNGETPRSF 1055
            + C+ LQ+IMPGP+ LTPE M++++L KQEL++ LN LS RE+ I+ L+FGLNGE P+SF
Sbjct: 243  RSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSF 302

Query: 1056 EEIARVLKLSRERIRQVNGNALSKLKQNSMVDDMIVYI 1169
            EEI + L LSRE IRQ N   LSKLK+  ++D +  Y+
Sbjct: 303  EEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDYL 340


>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
            gi|355488487|gb|AES69690.1| RNA polymerase sigma factor
            [Medicago truncatula]
          Length = 403

 Score =  172 bits (436), Expect(2) = 7e-77
 Identities = 87/153 (56%), Positives = 116/153 (75%)
 Frame = +3

Query: 711  MIPKIAEANNNLAVKLRRSPSLEEIAESVGTTVRTVRLIYRRSKEPVSLDRALTSQGCMN 890
            M+ KIAEANN L  +LRR P+  EIAE +   V TV+L+  RS++P+SLDR++T Q  + 
Sbjct: 250  MVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITDQSNLI 309

Query: 891  LQDIMPGPEELTPETMLIKQLRKQELEKTLNQLSDRESTIVRLHFGLNGETPRSFEEIAR 1070
            L++I+PGP E+ PE M+ +QL KQ + K LN L  RE  IVRL+FGLNGETP SFEEI +
Sbjct: 310  LKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSFEEIGK 369

Query: 1071 VLKLSRERIRQVNGNALSKLKQNSMVDDMIVYI 1169
            +LKLSRERIRQ++G ALSKL+QN++VD +  Y+
Sbjct: 370  LLKLSRERIRQIHGIALSKLEQNTLVDSLKFYV 402



 Score =  143 bits (360), Expect(2) = 7e-77
 Identities = 78/167 (46%), Positives = 109/167 (65%), Gaps = 3/167 (1%)
 Frame = +1

Query: 190 CEVEKEGCAEIRHIFSRSKT---KRAGHHLSSKEEAEYILLIKEEAKLEAVRRKILETTK 360
           C VE+E    I++ F R K          LSS +EAE  L +KE AK+E  ++++ E   
Sbjct: 86  CMVEEEN---IQNNFLRQKVVVGSVTSGFLSSTDEAELCLCLKEGAKIEVAKQRMTEQEG 142

Query: 361 HDPTLNQLADVVGVPKSSLDKILCGGRESRERITESYKRLVISIASNYQGRGLNMQDLVQ 540
                N       +  +S+DK+L   R+S+ER+   Y+ LV SIA++YQG+GL++QDL+Q
Sbjct: 143 -----NSAISRFTLENTSVDKVLINTRKSKERLARDYRGLVASIAAHYQGKGLSIQDLIQ 197

Query: 541 EGSIGLLRGVQKFNPERGYKLSTYVYWWIRQAILKSVASKSRTIRLP 681
           EG+IGLL G +KF+P RG KLSTYVYWWI+Q I+K++A KSR IRLP
Sbjct: 198 EGTIGLLHGAEKFDPNRGCKLSTYVYWWIKQGIIKALAKKSRLIRLP 244