BLASTX nr result

ID: Angelica22_contig00024929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024929
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    82   8e-14
ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub...    73   3e-11
gb|AAR15502.1| F-box protein [Arabidopsis arenosa]                     71   1e-10
gb|AAR15451.1| F-box protein [Arabidopsis arenosa]                     71   1e-10
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    67   2e-09

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 53/115 (46%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
 Frame = -1

Query: 380 CSSCPYAVFETNFRYYIYNPTTDQLLTLPK--NDTLDHSFAAVLAFDPSKSPHYRVFLWA 207
           CSS  Y   ++  +YYIYNPTT Q  TLP     ++       LAFDPSKS  Y+V    
Sbjct: 108 CSSVDYN--DSERKYYIYNPTTKQFTTLPPLCGRSVRRVLGVNLAFDPSKSHTYKVVCVQ 165

Query: 206 RVKAPQDTLPFMEQFYIYSSETGTWRPSGQPFTSPRSDKF*SNIVYCNGCIHWIN 42
           R K+  D      Q  I S ETG WR SG PF +P S  F S  VY NG IHWI+
Sbjct: 166 RCKSSYDHC----QIQISSLETGPWRVSGVPFAAPISVDFPSG-VYWNGAIHWIS 215


>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
           gi|34013883|gb|AAQ56109.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317116|gb|EFH47538.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 48/114 (42%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = -1

Query: 380 CSSCPYAVFETNFRYYIYNPTTDQLLTLPKNDTLDHSFAAVLAFDPSKSPHYRVF-LWAR 204
           CS      F TN  YY+YNPTT Q   LP+   +    A  LAFDPSKSPHY+VF L  R
Sbjct: 140 CSCASSNHFNTN--YYVYNPTTKQYTLLPQ---ITGHIALSLAFDPSKSPHYKVFCLRGR 194

Query: 203 VKAPQDTLPFMEQFYI--YSSETGTWRPSGQPFTSPRSDKF*SNIVYCNGCIHW 48
                 +    E ++I  YSS  G WR      TSP +    S  V+ NG +HW
Sbjct: 195 SNNSVSSASDSELYHIEVYSSNEGLWRRVDPALTSPSTFIEFSYSVFWNGAVHW 248


>gb|AAR15502.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 47/114 (41%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = -1

Query: 380 CSSCPYAVFETNFRYYIYNPTTDQLLTLPKNDTLDHSFAAVLAFDPSKSPHYRVF-LWAR 204
           CS      F TN  YY+YNPTT Q   LP+   +    A  LAFDPSKSPHY+VF L  R
Sbjct: 140 CSCASSNHFNTN--YYVYNPTTKQYTLLPQ---ITGHIALSLAFDPSKSPHYKVFCLRGR 194

Query: 203 VKAPQDTLPFMEQFYI--YSSETGTWRPSGQPFTSPRSDKF*SNIVYCNGCIHW 48
                 +    E ++I  YSS  G WR      TSP +    +  V+ NG +HW
Sbjct: 195 SNNSVSSASDSELYHIEVYSSNEGLWRRVVPVLTSPSTFIEFTYSVFWNGAVHW 248


>gb|AAR15451.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 47/114 (41%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = -1

Query: 380 CSSCPYAVFETNFRYYIYNPTTDQLLTLPKNDTLDHSFAAVLAFDPSKSPHYRVF-LWAR 204
           CS      F TN  YY+YNPTT Q   LP+   +    A  LAFDPSKSPHY+VF L  R
Sbjct: 140 CSCASSNHFNTN--YYVYNPTTKQYTLLPQ---ITGHIALSLAFDPSKSPHYKVFCLRGR 194

Query: 203 VKAPQDTLPFMEQFYI--YSSETGTWRPSGQPFTSPRSDKF*SNIVYCNGCIHW 48
                 +    E ++I  YSS  G WR      TSP +    +  V+ NG +HW
Sbjct: 195 SNNSVSSASDSELYHIEVYSSNEGLWRRVVPVLTSPSTFIEFTYSVFWNGAVHW 248


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 48/119 (40%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
 Frame = -1

Query: 380 CSSCPYAVFETNFRYYIYNPTTDQLLTLPK--NDTLDHS----FAAVLAFDPSKSPHYRV 219
           CS+ P    + N  YYI NPTT Q+ TLP    D    S    F   LAFDP KS +Y+V
Sbjct: 112 CSTLPKIGQKRN--YYISNPTTKQMFTLPSLVGDANAASPTTLFGLNLAFDPLKSCNYKV 169

Query: 218 FLWARVKAPQDTLPFMEQFYIYSSETGTWRPSGQPFTSPRSDKF*SNIVYCNGCIHWIN 42
                V++  +++ +  Q   Y SE   WR SG PF +P  D    N V+ NG IHWI+
Sbjct: 170 IC---VRSTTNSI-YQYQIETYQSEIAAWRLSGLPFVAP-FDMVFDNGVFWNGAIHWIS 223


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