BLASTX nr result

ID: Angelica22_contig00024900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024900
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...    59   3e-07
gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]    59   3e-07
ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06...    58   7e-07
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
ref|XP_002322524.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = -2

Query: 156 LPEELIDQVLFGLPVKSLLRFRCVSKGWCSLIDSKAFVKKHHKRMIECNTRG 1
           LP+ELI ++L  LP+KSL +F CVSK W  LI S AFVKKH K  +  N +G
Sbjct: 11  LPDELITEILLRLPIKSLSKFMCVSKSWLQLISSPAFVKKHIK--LTANDKG 60


>gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 327

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/43 (62%), Positives = 32/43 (74%)
 Frame = -2

Query: 156 LPEELIDQVLFGLPVKSLLRFRCVSKGWCSLIDSKAFVKKHHK 28
           LP+ELI ++L  LP+KSLL+F CVSK W  LI S AFVK H K
Sbjct: 12  LPDELITEILLKLPIKSLLKFMCVSKSWLQLISSPAFVKNHIK 54


>ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 375

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = -2

Query: 183 LRQHFWKMSLPEELIDQVLFGLPVKSLLRFRCVSKGWCSLIDSKAFVKKH 34
           LR+    + LP+ELI Q+L  LPVKSLLRF+CVSK W SLI    F K H
Sbjct: 9   LRRRNKTVFLPQELIIQILLRLPVKSLLRFKCVSKSWLSLITDPHFAKSH 58


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/52 (46%), Positives = 37/52 (71%)
 Frame = -2

Query: 159 SLPEELIDQVLFGLPVKSLLRFRCVSKGWCSLIDSKAFVKKHHKRMIECNTR 4
           ++P+E++ ++L  LPVKSLL++RCV + W SLI + +F+  H    IECN R
Sbjct: 4   NIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNR 55


>ref|XP_002322524.1| predicted protein [Populus trichocarpa] gi|222867154|gb|EEF04285.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = -2

Query: 162 MSLPEELIDQVLFGLPVKSLLRFRCVSKGWCSLIDSKAFVKKHHKRMI 19
           + LPE++I  +L  LPVKSLL FRCVS+ WCSLI+S+ F+K H +  +
Sbjct: 29  VKLPEDVIAHILSYLPVKSLLLFRCVSRLWCSLIESEYFIKLHLRNFV 76


Top