BLASTX nr result
ID: Angelica22_contig00024890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00024890
(261 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29194.3| unnamed protein product [Vitis vinifera] 117 1e-24
ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containi... 108 5e-22
ref|XP_003612489.1| Pentatricopeptide repeat-containing protein ... 103 2e-20
ref|XP_002867948.1| pentatricopeptide repeat-containing protein ... 88 6e-16
>emb|CBI29194.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 117 bits (292), Expect = 1e-24
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +1
Query: 1 KDVVTWNTMIDGFATNGLIMEAFDCLYEMQSTGHVHPDTVTLLTILPLCAELNLSREGKT 180
KD+V+WN M+DG A N I EAFD L+EMQ G V PD+VT++ I+PLCAEL L REG+
Sbjct: 281 KDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRA 340
Query: 181 IHAFTLKRAMGLDMSVMNSLIDMYMKC 261
+H TL+R MGLD SV NSLIDMY KC
Sbjct: 341 VHGLTLRREMGLDFSVTNSLIDMYSKC 367
Score = 60.5 bits (145), Expect = 1e-07
Identities = 31/86 (36%), Positives = 43/86 (50%)
Frame = +1
Query: 4 DVVTWNTMIDGFATNGLIMEAFDCLYEMQSTGHVHPDTVTLLTILPLCAELNLSREGKTI 183
D+V WNT++ G NG EA M+ V D+V L ++ C L L G ++
Sbjct: 464 DIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSL 523
Query: 184 HAFTLKRAMGLDMSVMNSLIDMYMKC 261
H LK M D+ V N+LI MY +C
Sbjct: 524 HGLALKTLMESDIRVQNALITMYGRC 549
>ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 117 bits (292), Expect = 1e-24
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +1
Query: 1 KDVVTWNTMIDGFATNGLIMEAFDCLYEMQSTGHVHPDTVTLLTILPLCAELNLSREGKT 180
KD+V+WN M+DG A N I EAFD L+EMQ G V PD+VT++ I+PLCAEL L REG+
Sbjct: 240 KDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRA 299
Query: 181 IHAFTLKRAMGLDMSVMNSLIDMYMKC 261
+H TL+R MGLD SV NSLIDMY KC
Sbjct: 300 VHGLTLRREMGLDFSVTNSLIDMYSKC 326
Score = 60.5 bits (145), Expect = 1e-07
Identities = 31/86 (36%), Positives = 43/86 (50%)
Frame = +1
Query: 4 DVVTWNTMIDGFATNGLIMEAFDCLYEMQSTGHVHPDTVTLLTILPLCAELNLSREGKTI 183
D+V WNT++ G NG EA M+ V D+V L ++ C L L G ++
Sbjct: 445 DIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSL 504
Query: 184 HAFTLKRAMGLDMSVMNSLIDMYMKC 261
H LK M D+ V N+LI MY +C
Sbjct: 505 HGLALKTLMESDIRVQNALITMYGRC 530
>ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Glycine max]
Length = 944
Score = 108 bits (270), Expect = 5e-22
Identities = 51/88 (57%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 KDVVTWNTMIDGFATNGLIMEAFDCLYEMQSTGHVHPDTVTLLTILPLCAELNLSREGKT 180
KD+V+WN M++GFA+NG I E FD L +MQ G PD VTL+T+LPLCAEL LSREG+T
Sbjct: 357 KDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRT 416
Query: 181 IHAFTLKRAMGLD-MSVMNSLIDMYMKC 261
IH + ++R M D + ++NSLI MY KC
Sbjct: 417 IHGYAIRRQMISDHVMLLNSLIGMYSKC 444
Score = 64.3 bits (155), Expect = 1e-08
Identities = 32/86 (37%), Positives = 48/86 (55%)
Frame = +1
Query: 4 DVVTWNTMIDGFATNGLIMEAFDCLYEMQSTGHVHPDTVTLLTILPLCAELNLSREGKTI 183
D+ +WNT+I G EA + M+ ++ D++TL++ L CA L L GK++
Sbjct: 565 DIASWNTLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSL 624
Query: 184 HAFTLKRAMGLDMSVMNSLIDMYMKC 261
H T+K +G D V NSLI MY +C
Sbjct: 625 HGLTVKSPLGSDTRVQNSLITMYDRC 650
>ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513824|gb|AES95447.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 955
Score = 103 bits (256), Expect = 2e-20
Identities = 50/88 (56%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 KDVVTWNTMIDGFATNGLIMEAFDCLYEMQSTGHVHPDTVTLLTILPLCAELNLSREGKT 180
KD+V+WN M++G+A+N I EAFD + EMQ+TG PD VTL T+LPLCAEL L REG+T
Sbjct: 367 KDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRT 426
Query: 181 IHAFTLKRAMGLD-MSVMNSLIDMYMKC 261
IH + ++R M D + + N LIDMY KC
Sbjct: 427 IHGYAIRRHMVPDHLPLRNGLIDMYSKC 454
Score = 62.8 bits (151), Expect = 3e-08
Identities = 30/86 (34%), Positives = 46/86 (53%)
Frame = +1
Query: 4 DVVTWNTMIDGFATNGLIMEAFDCLYEMQSTGHVHPDTVTLLTILPLCAELNLSREGKTI 183
D+ +WNT+I G EA + M+ + D++TL+ +L A + L +GK++
Sbjct: 573 DIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSL 632
Query: 184 HAFTLKRAMGLDMSVMNSLIDMYMKC 261
H+ LK G D V NSLI MY +C
Sbjct: 633 HSLALKSPFGSDTRVQNSLITMYDRC 658
>ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313784|gb|EFH44207.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 919
Score = 88.2 bits (217), Expect = 6e-16
Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 KDVVTWNTMIDGFATNGLIMEAFDCLYEMQSTGHVHPDTVTLLTILPLCAELNLSREGKT 180
KDV++WN +++G + NG+ EAF L EMQS + PD T+++I +C + LSREG+
Sbjct: 345 KDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDFCLSREGRA 404
Query: 181 IHAFTLKRAM-GLDMSVMNSLIDMYMKC 261
IH +T++R M + V+NS+IDMY KC
Sbjct: 405 IHGYTVRREMQSRALEVINSVIDMYGKC 432
Score = 58.2 bits (139), Expect = 7e-07
Identities = 27/87 (31%), Positives = 46/87 (52%)
Frame = +1
Query: 1 KDVVTWNTMIDGFATNGLIMEAFDCLYEMQSTGHVHPDTVTLLTILPLCAELNLSREGKT 180
+D+ +WN++I G A++G +E+ M G + D +TLL + L L +G+
Sbjct: 533 RDLTSWNSVIYGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQGRC 592
Query: 181 IHAFTLKRAMGLDMSVMNSLIDMYMKC 261
+H +K LD + N+LI MY +C
Sbjct: 593 LHGLAIKSLRELDTQLQNTLITMYGRC 619