BLASTX nr result

ID: Angelica22_contig00024862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024862
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   174   1e-41
gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]          170   2e-40
ref|XP_002511894.1| zinc finger protein, putative [Ricinus commu...   162   4e-38
ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|2...   162   4e-38
ref|XP_002302597.1| predicted protein [Populus trichocarpa] gi|2...   162   4e-38

>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score =  174 bits (441), Expect = 1e-41
 Identities = 88/164 (53%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
 Frame = -2

Query: 598 GYTQVFFPKXXXXXXXXXXXXXXXISTVLTHIGVQDFVQQEHLSYHDNPTIL--YPPLSA 425
           GYT+VF PK               I ++   +G+ DF++ + +S+ +    +  YPP+SA
Sbjct: 6   GYTEVFLPKLFLHTLSFLGFIRKLIFSLFHFLGLSDFLETD-VSWSETQAQVPEYPPVSA 64

Query: 424 TLIRELLPVVKFEQV--SGESPQSCAVCLYEMEAGEEIRWLSNCKHVFHMGCLDRWMDHD 251
            LIRE+LPV+KF +    G++P+SCAVCLY+ E GEEIR L+NCKH+FH  CLDRWMDHD
Sbjct: 65  VLIREILPVMKFGEAVCGGDAPESCAVCLYDFEVGEEIRRLTNCKHIFHRSCLDRWMDHD 124

Query: 250 QKTCPLCRTNFVPFGLQDVFNQRLWDACGITDDYYNGEYNSVSG 119
           QKTCPLCRT FVP  +QD FNQRLW A GITD Y   EY +VSG
Sbjct: 125 QKTCPLCRTPFVPDEMQDEFNQRLWAASGITDFY--SEYGTVSG 166


>gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]
          Length = 171

 Score =  170 bits (431), Expect = 2e-40
 Identities = 84/165 (50%), Positives = 113/165 (68%), Gaps = 7/165 (4%)
 Frame = -2

Query: 598 GYTQVFFPKXXXXXXXXXXXXXXXISTVLTHIGVQDFVQQEHLSYHDNPTILY--PPLSA 425
           GYT+VF PK               I  +  ++G+ DF++ +++ + DNPT ++  PP+SA
Sbjct: 6   GYTEVFLPKLFVHTLSLLGFIRSLILCLFNYLGLSDFLETDNI-WPDNPTRIHSHPPVSA 64

Query: 424 TLIRELLPVVKFEQV-----SGESPQSCAVCLYEMEAGEEIRWLSNCKHVFHMGCLDRWM 260
           TLIRE+LPV+KFE +      G+ P+SCAVCLYE +  +EIRWL NCKH+FH  CLDRWM
Sbjct: 65  TLIREILPVIKFEDLVPGAGEGDLPESCAVCLYEFDGEDEIRWLKNCKHIFHRACLDRWM 124

Query: 259 DHDQKTCPLCRTNFVPFGLQDVFNQRLWDACGITDDYYNGEYNSV 125
           DHD+ TCPLCRT+FVP  +Q+ FNQRL  A   +D YY+ EY+SV
Sbjct: 125 DHDRNTCPLCRTSFVPDEMQEEFNQRLLAASDNSDFYYS-EYSSV 168


>ref|XP_002511894.1| zinc finger protein, putative [Ricinus communis]
           gi|223549074|gb|EEF50563.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 171

 Score =  162 bits (410), Expect = 4e-38
 Identities = 82/164 (50%), Positives = 106/164 (64%), Gaps = 6/164 (3%)
 Frame = -2

Query: 598 GYTQVFFPKXXXXXXXXXXXXXXXISTVLTHIGVQDFVQQEHLSYHDNPTILY--PPLSA 425
           GYT+VF PK               I      +G+ DF++ +++ + +NP   Y  PP+SA
Sbjct: 6   GYTEVFLPKLFVHTLSFLGFIRNIILCFFNFLGLSDFLETDNI-WPENPIRNYTHPPVSA 64

Query: 424 TLIRELLPVVKFEQV---SGESPQSCAVCLYEMEAGEEIRWLSNCKHVFHMGCLDRWMDH 254
           TLIRE+LPV+K+E +     E P+SCAVCLYE E   EIRWL NCKH+FH  CLDRWMDH
Sbjct: 65  TLIREILPVIKYEDLVAGDAELPESCAVCLYEFEREAEIRWLKNCKHIFHRACLDRWMDH 124

Query: 253 DQKTCPLCRTNFVPFGLQDVFNQRLWDACGITD-DYYNGEYNSV 125
           D+ TCPLCRT+FVP  +Q+ FNQRL  A    D D++  EY+SV
Sbjct: 125 DRNTCPLCRTSFVPDEMQEEFNQRLLAAAADNDGDFFYSEYSSV 168


>ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|222861586|gb|EEE99128.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  162 bits (410), Expect = 4e-38
 Identities = 78/160 (48%), Positives = 103/160 (64%), Gaps = 8/160 (5%)
 Frame = -2

Query: 598 GYTQVFFPKXXXXXXXXXXXXXXXISTVLTHIGVQDFVQQEHLSYHDNPT--ILYPPLSA 425
           GY++V  PK               +  + T++G+ DF++ +++ + D PT    YP LSA
Sbjct: 6   GYSEVLLPKLFVHALSLLGFIRGLVLCLFTYVGLSDFLETDNI-WPDYPTRTSFYPSLSA 64

Query: 424 TLIRELLPVVKFEQVSG------ESPQSCAVCLYEMEAGEEIRWLSNCKHVFHMGCLDRW 263
            LIRE+LPV+KFE + G      + P+SCAVCLYE E  +EIRWL NCKH+FH  CLDRW
Sbjct: 65  ALIREILPVIKFEDLLGGDGGCCDLPESCAVCLYEFEGEDEIRWLKNCKHIFHRACLDRW 124

Query: 262 MDHDQKTCPLCRTNFVPFGLQDVFNQRLWDACGITDDYYN 143
           MDHD+ TCPLCRT+FVP  +Q  FNQRLW A     D+Y+
Sbjct: 125 MDHDRNTCPLCRTSFVPDEMQGEFNQRLWAANSDDSDFYD 164


>ref|XP_002302597.1| predicted protein [Populus trichocarpa] gi|222844323|gb|EEE81870.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  162 bits (410), Expect = 4e-38
 Identities = 79/159 (49%), Positives = 105/159 (66%), Gaps = 8/159 (5%)
 Frame = -2

Query: 598 GYTQVFFPKXXXXXXXXXXXXXXXISTVLTHIGVQDFVQQEHLSYHDNPTIL--YPPLSA 425
           GY++VF PK               I  +  ++G+  F++ +++ + DNP  +  YPPLSA
Sbjct: 6   GYSEVFLPKLFVHILSFLGFIRNLILCLFNYLGLSGFLETDNI-WPDNPIRMSCYPPLSA 64

Query: 424 TLIRELLPVVKFEQ-VSGES-----PQSCAVCLYEMEAGEEIRWLSNCKHVFHMGCLDRW 263
            L+RE+LPV+KFE  V+G+      P+SCAVCLYE E  +EIRWL NCKH+FH  CLDRW
Sbjct: 65  ALLREILPVIKFEDLVTGDGGCCDLPESCAVCLYEFEGEDEIRWLKNCKHIFHRTCLDRW 124

Query: 262 MDHDQKTCPLCRTNFVPFGLQDVFNQRLWDACGITDDYY 146
           MDHD+KTCPLCR +FVP  +Q+ FNQRLW A     D+Y
Sbjct: 125 MDHDRKTCPLCRNSFVPDEMQEEFNQRLWAANNDVSDFY 163


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