BLASTX nr result

ID: Angelica22_contig00024820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024820
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|1M18|A Chain A, Ligand Binding Alters The Structure And Dyna...    73   3e-11
gb|ACS12996.1| histone H3 [Dolania americana]                          73   3e-11
sp|P02302.2|H3C_XENLA RecName: Full=Histone H3.3C                      73   3e-11
gb|EHB12465.1| Histone H3.3 [Heterocephalus glaber]                    72   4e-11
gb|AEK87149.1| histone H3 [Fagopyrum tataricum]                        71   8e-11

>pdb|1M18|A Chain A, Ligand Binding Alters The Structure And Dynamics Of
           Nucleosomal Dna gi|28948514|pdb|1M18|E Chain E, Ligand
           Binding Alters The Structure And Dynamics Of Nucleosomal
           Dna gi|28948520|pdb|1M19|A Chain A, Ligand Binding
           Alters The Structure And Dynamics Of Nucleosomal Dna
           gi|28948524|pdb|1M19|E Chain E, Ligand Binding Alters
           The Structure And Dynamics Of Nucleosomal Dna
           gi|28948530|pdb|1M1A|A Chain A, Ligand Binding Alters
           The Structure And Dynamics Of Nucleosomal Dna
           gi|28948534|pdb|1M1A|E Chain E, Ligand Binding Alters
           The Structure And Dynamics Of Nucleosomal Dna
          Length = 135

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/52 (69%), Positives = 39/52 (75%)
 Frame = +2

Query: 221 AQTKLTTRKSTRGKVPKKQLEIKAAPMCAPTTGGFRKLHRYRPRIVALREIR 376
           A+TK T RKST GK P+KQL  KAA  CAP TGG +K HRYRP  VALREIR
Sbjct: 1   ARTKQTARKSTGGKAPRKQLVTKAAKKCAPATGGVKKPHRYRPGTVALREIR 52


>gb|ACS12996.1| histone H3 [Dolania americana]
          Length = 123

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/52 (69%), Positives = 39/52 (75%)
 Frame = +2

Query: 221 AQTKLTTRKSTRGKVPKKQLEIKAAPMCAPTTGGFRKLHRYRPRIVALREIR 376
           A+TK T RKST GK P+KQL  KAA  CAP TGG +K HRYRP  VALREIR
Sbjct: 1   ARTKQTARKSTGGKAPRKQLATKAARKCAPATGGVKKPHRYRPGTVALREIR 52


>sp|P02302.2|H3C_XENLA RecName: Full=Histone H3.3C
          Length = 136

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/52 (69%), Positives = 39/52 (75%)
 Frame = +2

Query: 221 AQTKLTTRKSTRGKVPKKQLEIKAAPMCAPTTGGFRKLHRYRPRIVALREIR 376
           A+TK T RKST GK P+KQL  KAA  CAP TGG +K HRYRP  VALREIR
Sbjct: 2   ARTKQTARKSTGGKAPRKQLVTKAAKKCAPATGGVKKPHRYRPGTVALREIR 53


>gb|EHB12465.1| Histone H3.3 [Heterocephalus glaber]
          Length = 93

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/52 (69%), Positives = 39/52 (75%)
 Frame = +2

Query: 221 AQTKLTTRKSTRGKVPKKQLEIKAAPMCAPTTGGFRKLHRYRPRIVALREIR 376
           A TK T RKST GK P+KQL  KAAP  AP+TGG +K HRYRP  VALREIR
Sbjct: 2   AHTKQTARKSTGGKAPRKQLATKAAPKSAPSTGGVKKPHRYRPGTVALREIR 53


>gb|AEK87149.1| histone H3 [Fagopyrum tataricum]
          Length = 122

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/52 (69%), Positives = 39/52 (75%)
 Frame = +2

Query: 221 AQTKLTTRKSTRGKVPKKQLEIKAAPMCAPTTGGFRKLHRYRPRIVALREIR 376
           A+TK T RKST GK P+KQL  KAA   APTTGG +K HRYRP  VALREIR
Sbjct: 2   ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKSHRYRPGTVALREIR 53


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