BLASTX nr result

ID: Angelica22_contig00024647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024647
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    67   2e-09
ref|XP_002327015.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 49/116 (42%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
 Frame = +2

Query: 17  ELSRASTHRRESSEATS-NVDKDSVGAPVM-----PPGESLAAEVAGGRNSWLRDYVD-- 172
           E++ ASTHRR  SE+++   DKD  GA        PPG S AAEVA GR SWL+DYVD  
Sbjct: 226 EVTVASTHRRGGSESSAAEKDKDDAGAQSNQLAPEPPGPSTAAEVASGR-SWLKDYVDRL 284

Query: 173 ----XXXXXXXXXXXXXXXXXXXXXXXXEPVVAVG--DLESSRVGEEISELFRWLS 322
                                           +VG  DLE++RVGEEISE+FRW S
Sbjct: 285 SSTASLSISSRALSFRSSGRFFTGSSRRNETASVGEWDLEANRVGEEISEMFRWFS 340


>ref|XP_002327015.1| predicted protein [Populus trichocarpa] gi|222835330|gb|EEE73765.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
 Frame = +2

Query: 17  ELSRASTHRRESSEATSNVDKDSVGAPVMPPGESLAAEVAGGRNSWLRDYVD--XXXXXX 190
           E++   +HRR  S+     +    G P +   + LAAEVA  R SWLR+YVD        
Sbjct: 233 EVTINQSHRRSMSK-----ESGGGGGPTLSEQQILAAEVAAARGSWLREYVDRLSASLSS 287

Query: 191 XXXXXXXXXXXXXXXXXXEPVVAVG--DLESSRVGEEISELFRWLS 322
                               +  VG  DLE++RVGEEISELFRW S
Sbjct: 288 RTASFRGSGRFFTGSSRRSEIAGVGDYDLEANRVGEEISELFRWFS 333


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