BLASTX nr result

ID: Angelica22_contig00024595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024595
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    87   1e-15
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]              87   1e-15
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...    87   1e-15
gb|AAD32876.1|AC005489_14 F14N23.14 [Arabidopsis thaliana]             87   1e-15
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]          87   1e-15

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/72 (52%), Positives = 54/72 (75%)
 Frame = +1

Query: 1   IQMQDNSLIIRNQVRELIANVEMSKNRLFTLDMQTKVQKCLKSVIKNDSWLWHLRYGHLG 180
           I+++DN+L IR+Q   LI  V MSKNR+F L+++  + +CLK   K +SWLWHLR+GHL 
Sbjct: 417 IRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLN 476

Query: 181 FSGLKLLSKTKM 216
           F GL+LLS+ +M
Sbjct: 477 FGGLELLSRKEM 488


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/72 (52%), Positives = 54/72 (75%)
 Frame = +1

Query: 1   IQMQDNSLIIRNQVRELIANVEMSKNRLFTLDMQTKVQKCLKSVIKNDSWLWHLRYGHLG 180
           I+++DN+L IR+Q   LI  V MSKNR+F L+++  + +CLK   K +SWLWHLR+GHL 
Sbjct: 379 IRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLN 438

Query: 181 FSGLKLLSKTKM 216
           F GL+LLS+ +M
Sbjct: 439 FGGLELLSRKEM 450


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/72 (52%), Positives = 54/72 (75%)
 Frame = +1

Query: 1   IQMQDNSLIIRNQVRELIANVEMSKNRLFTLDMQTKVQKCLKSVIKNDSWLWHLRYGHLG 180
           I+++DN+L IR+Q   LI  V MSKNR+F L+++  + +CLK   K +SWLWHLR+GHL 
Sbjct: 417 IRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLN 476

Query: 181 FSGLKLLSKTKM 216
           F GL+LLS+ +M
Sbjct: 477 FGGLELLSRKEM 488


>gb|AAD32876.1|AC005489_14 F14N23.14 [Arabidopsis thaliana]
          Length = 194

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/72 (52%), Positives = 54/72 (75%)
 Frame = +1

Query: 1   IQMQDNSLIIRNQVRELIANVEMSKNRLFTLDMQTKVQKCLKSVIKNDSWLWHLRYGHLG 180
           I+++DN+L IR+Q   LI  V MSKNR+F L+++  + +CLK   K +SWLWHLR+GHL 
Sbjct: 100 IRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLN 159

Query: 181 FSGLKLLSKTKM 216
           F GL+LLS+ +M
Sbjct: 160 FGGLELLSRKEM 171


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/72 (52%), Positives = 54/72 (75%)
 Frame = +1

Query: 1   IQMQDNSLIIRNQVRELIANVEMSKNRLFTLDMQTKVQKCLKSVIKNDSWLWHLRYGHLG 180
           I+++DN+L IR+Q   LI  V MSKNR+F L+++  + +CLK   K +SWLWHLR+GHL 
Sbjct: 417 IRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLN 476

Query: 181 FSGLKLLSKTKM 216
           F GL+LLS+ +M
Sbjct: 477 FGGLELLSRKEM 488


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