BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024511
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ...    68   9e-10
ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789...    64   2e-08
ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup9...    60   2e-07
ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup9...    60   2e-07
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...    59   3e-07

>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
          Length = 994

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 49/133 (36%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
 Frame = +3

Query: 6   GGTSTGVFGQKPSSIPFGQSSNYGGKSTGIFGQTASSNSFGQNSN-IFGSVPGNGGTSAG 182
           GGTSTGVFG   SS PF  ++ +GG S+  FG T S  +FG +S   FGS   +    + 
Sbjct: 54  GGTSTGVFGAAQSSSPFPSTTTFGGSSSPAFGATPS--TFGSSSTPAFGSSSSSSFGGSS 111

Query: 183 VFGQTAXXXXXXXXXXXXXXVPNNGGTSMGLFGTTV--SSTPFG------FQVGSVPASG 338
           +FGQ                  +    S   FG+ V  SS+PFG      F   S PA G
Sbjct: 112 IFGQKPLFGGFGSTPAQTNPFGSTNQQSQPAFGSNVFGSSSPFGAPSQSAFGATSTPAFG 171

Query: 339 GTSMGVSGATCSP 377
            TS    GAT +P
Sbjct: 172 STSTPAFGATSTP 184


>ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789177 [Glycine max]
          Length = 1007

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 54/153 (35%), Positives = 64/153 (41%), Gaps = 29/153 (18%)
 Frame = +3

Query: 6   GGTSTGVFGQKPSSIPFGQSSN---------YGGKSTGIFGQTASSNSFGQNSNIFGSVP 158
           GGTSTGVFG    + PFG SS+         +G  ST  FG  +SS+SFG  S++FG  P
Sbjct: 52  GGTSTGVFGTAQPASPFGASSSPAFGSSQPAFGSSSTPAFG--SSSSSFG-GSSVFGQKP 108

Query: 159 GNGG--------------------TSAGVFGQTAXXXXXXXXXXXXXXVPNNGGTSMGLF 278
             GG                      + +FG +                P  G TS   F
Sbjct: 109 AFGGFGSTPTQTSPFGAAQPSQPAFGSSIFGSSTPFGASSQPAFGATSTPAFGATSTPAF 168

Query: 279 GTTVSSTPFGFQVGSVPASGGTSMGVSGATCSP 377
           G T  STP  F   S PA G TS    GAT SP
Sbjct: 169 GAT--STP-AFGATSTPAFGATSTPAFGATSSP 198


>ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 2
           [Glycine max]
          Length = 1010

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 52/133 (39%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
 Frame = +3

Query: 6   GGTSTGVFGQKPSSIPFGQSSN---------YGGKSTGIFGQTASSNSFGQNSNIFGSVP 158
           GGTSTGVFG    S PFG SS+         +   ST  FG  +SS+SFG  S++FG  P
Sbjct: 53  GGTSTGVFGTAQPSSPFGASSSPAFGSSQPAFVSSSTPAFG--SSSSSFG-GSSVFGQKP 109

Query: 159 GNGGTSAGVFGQTAXXXXXXXXXXXXXXVPNNGGTSMGLFGTTVSSTPFGFQVGSVPASG 338
             GG     FG T                P+       +FG   SSTPFG    S PA G
Sbjct: 110 AFGG-----FGSTPTQTTPFGAAQ-----PSQPAFGSSIFG---SSTPFG--ASSQPAFG 154

Query: 339 GTSMGVSGATCSP 377
            TS    GAT +P
Sbjct: 155 ATSNPAFGATSTP 167


>ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
           [Glycine max]
          Length = 1038

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 52/133 (39%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
 Frame = +3

Query: 6   GGTSTGVFGQKPSSIPFGQSSN---------YGGKSTGIFGQTASSNSFGQNSNIFGSVP 158
           GGTSTGVFG    S PFG SS+         +   ST  FG  +SS+SFG  S++FG  P
Sbjct: 53  GGTSTGVFGTAQPSSPFGASSSPAFGSSQPAFVSSSTPAFG--SSSSSFG-GSSVFGQKP 109

Query: 159 GNGGTSAGVFGQTAXXXXXXXXXXXXXXVPNNGGTSMGLFGTTVSSTPFGFQVGSVPASG 338
             GG     FG T                P+       +FG   SSTPFG    S PA G
Sbjct: 110 AFGG-----FGSTPTQTTPFGAAQ-----PSQPAFGSSIFG---SSTPFG--ASSQPAFG 154

Query: 339 GTSMGVSGATCSP 377
            TS    GAT +P
Sbjct: 155 ATSNPAFGATSTP 167


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
           [Vitis vinifera]
          Length = 1013

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 50/142 (35%), Positives = 61/142 (42%), Gaps = 18/142 (12%)
 Frame = +3

Query: 6   GGTSTGVFGQKPSSIPFGQSSNYGGKSTGIFGQT-------------ASSNSFGQNSNIF 146
           GGTSTGVFG   SS P   ++ +G  S+  FG +             +SS+SFG  S++F
Sbjct: 54  GGTSTGVFGATQSSSPLPSTATFGASSSPAFGSSVPAFGASSTPAFGSSSSSFG-GSSVF 112

Query: 147 GSVPGNGGTSAGVFGQTAXXXXXXXXXXXXXXVPNNGGTSMGLFGTTVSSTPFG-----F 311
           G  PG GG     FG T                 +       LFG   SSTPFG     F
Sbjct: 113 GQKPGFGG-----FGSTPTQTSPFGSAFQ----QSQPAFGSSLFG---SSTPFGASQAAF 160

Query: 312 QVGSVPASGGTSMGVSGATCSP 377
              S PA   TS    GAT +P
Sbjct: 161 GASSTPAFAATSTPAFGATSTP 182