BLASTX nr result

ID: Angelica22_contig00024492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024492
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603707.1| Rhamnogalacturonate lyase [Medicago truncatu...    76   2e-12
ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyas...    75   4e-12
ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like ...    75   5e-12
ref|XP_002892533.1| hypothetical protein ARALYDRAFT_334271 [Arab...    75   5e-12
ref|XP_002892532.1| predicted protein [Arabidopsis lyrata subsp....    75   7e-12

>ref|XP_003603707.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355492755|gb|AES73958.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 643

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 32/70 (45%), Positives = 43/70 (61%)
 Frame = +3

Query: 36  SNMQVYVNRSPAEGYPLVRIGQIGHDNAIARHGIHGLYWLFNVQIPGRALIRGRNKILLN 215
           + +Q+ +N   A   PL   G IG +N IARHGIHGLYWL+N+ + G  L++G N I L 
Sbjct: 561 AELQIRINNLDATSPPLFSTGVIGKENTIARHGIHGLYWLYNIDVQGSLLVKGNNTIFLT 620

Query: 216 HRTASSPFIG 245
             T   PF+G
Sbjct: 621 QATKDGPFVG 630


>ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/69 (55%), Positives = 44/69 (63%)
 Frame = +3

Query: 33  LSNMQVYVNRSPAEGYPLVRIGQIGHDNAIARHGIHGLYWLFNVQIPGRALIRGRNKILL 212
           LS +QV VN +P    PL   G IG DN+IARHGIHGLYWL+NV IPG  L+ G N I L
Sbjct: 554 LSELQVRVN-NPKAPRPLFSSGLIGRDNSIARHGIHGLYWLYNVGIPGTQLVEGDNTIFL 612

Query: 213 NHRTASSPF 239
                + PF
Sbjct: 613 TQTRGNGPF 621


>ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 37/69 (53%), Positives = 44/69 (63%)
 Frame = +3

Query: 33  LSNMQVYVNRSPAEGYPLVRIGQIGHDNAIARHGIHGLYWLFNVQIPGRALIRGRNKILL 212
           LS +QV VN +P    PL   G IG DN+IARHGIHGLYWL+NV +PG  L+ G N I L
Sbjct: 554 LSELQVRVN-NPKAPRPLFSSGLIGRDNSIARHGIHGLYWLYNVDMPGTQLVEGDNTIFL 612

Query: 213 NHRTASSPF 239
                + PF
Sbjct: 613 TQTRGNGPF 621


>ref|XP_002892533.1| hypothetical protein ARALYDRAFT_334271 [Arabidopsis lyrata subsp.
           lyrata] gi|297338375|gb|EFH68792.1| hypothetical protein
           ARALYDRAFT_334271 [Arabidopsis lyrata subsp. lyrata]
          Length = 633

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 38/78 (48%), Positives = 49/78 (62%)
 Frame = +3

Query: 12  IRI*S*LLSNMQVYVNRSPAEGYPLVRIGQIGHDNAIARHGIHGLYWLFNVQIPGRALIR 191
           + I S   S +Q+ VN + A   PL   G IG DN+IARHGIHGLYWLFNV++ G  L+ 
Sbjct: 546 VAIASATFSELQIRVNDANAS--PLFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSKLVE 603

Query: 192 GRNKILLNHRTASSPFIG 245
           G N + L    ++SPF G
Sbjct: 604 GENTLFLTQPRSTSPFQG 621


>ref|XP_002892532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338374|gb|EFH68791.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 664

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/71 (53%), Positives = 46/71 (64%)
 Frame = +3

Query: 33  LSNMQVYVNRSPAEGYPLVRIGQIGHDNAIARHGIHGLYWLFNVQIPGRALIRGRNKILL 212
           ++ +QV VN   A+  PL   GQIG DN IARHGIHGLYWL+NV +P  +L  G N I L
Sbjct: 575 VAELQVRVNDLSADP-PLFTTGQIGRDNTIARHGIHGLYWLYNVNVPAASLHLGNNTIYL 633

Query: 213 NHRTASSPFIG 245
               A+SPF G
Sbjct: 634 TQPLATSPFQG 644


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