BLASTX nr result

ID: Angelica22_contig00024443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024443
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312821.1| predicted protein [Populus trichocarpa] gi|1...    67   2e-09
ref|XP_002523813.1| DNA polymerase epsilon P17 subunit, putative...    65   4e-09
ref|XP_004140162.1| PREDICTED: DNA polymerase epsilon subunit 3-...    65   6e-09
ref|XP_002275482.1| PREDICTED: nuclear transcription factor Y su...    65   8e-09
dbj|BAK02266.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   1e-08

>ref|XP_002312821.1| predicted protein [Populus trichocarpa] gi|118484583|gb|ABK94165.1|
           unknown [Populus trichocarpa]
           gi|222849229|gb|EEE86776.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = -3

Query: 379 KESNRQTMSAEDVFKALEDIDFPEFVAPLRASLEEFRQKSAVKRL 245
           KES RQTM+A+DVFKALEDI+FPEFV PL+ SL EF++K+  K++
Sbjct: 66  KESKRQTMNADDVFKALEDIEFPEFVGPLKVSLSEFKRKNGGKKV 110


>ref|XP_002523813.1| DNA polymerase epsilon P17 subunit, putative [Ricinus communis]
           gi|223536901|gb|EEF38539.1| DNA polymerase epsilon P17
           subunit, putative [Ricinus communis]
          Length = 157

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/44 (65%), Positives = 40/44 (90%)
 Frame = -3

Query: 379 KESNRQTMSAEDVFKALEDIDFPEFVAPLRASLEEFRQKSAVKR 248
           KE+NRQTM+A+DVFKALE+I+F EF+ PL+ASL EF+QK+A ++
Sbjct: 80  KEANRQTMNADDVFKALEEIEFSEFIRPLKASLNEFKQKTAGRK 123


>ref|XP_004140162.1| PREDICTED: DNA polymerase epsilon subunit 3-like [Cucumis sativus]
          Length = 160

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/89 (40%), Positives = 47/89 (52%)
 Frame = -3

Query: 379 KESNRQTMSAEDVFKALEDIDFPEFVAPLRASLEEFRQKSAVKRLXXXXXXXXXXXXXXX 200
           KES RQT+ AEDV KALED++FPE V PL+ASL+EFR+K+A K+                
Sbjct: 64  KESKRQTIKAEDVLKALEDMEFPELVRPLKASLDEFRRKNAGKKAAASREKEAKKKRKVE 123

Query: 199 XXXXXXXXKQDNDDGNEDDREAHRNDSIE 113
                    +  DD   DD + +  D  E
Sbjct: 124 EPTVEGTDGESIDDVGNDDNDDNDEDEDE 152


>ref|XP_002275482.1| PREDICTED: nuclear transcription factor Y subunit B-8 [Vitis
           vinifera] gi|296084907|emb|CBI28316.3| unnamed protein
           product [Vitis vinifera]
          Length = 193

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/44 (65%), Positives = 40/44 (90%)
 Frame = -3

Query: 379 KESNRQTMSAEDVFKALEDIDFPEFVAPLRASLEEFRQKSAVKR 248
           KES RQT++A+DV KA+E+I+FPEFV PL+ASL+EFR+K+A K+
Sbjct: 64  KESRRQTINADDVLKAIEEIEFPEFVQPLKASLDEFRKKNAGKK 107


>dbj|BAK02266.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 211

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/44 (63%), Positives = 38/44 (86%)
 Frame = -3

Query: 379 KESNRQTMSAEDVFKALEDIDFPEFVAPLRASLEEFRQKSAVKR 248
           K+  RQT++AEDVFKAL++I+FPEFV PLR +LEEFR K+A ++
Sbjct: 133 KDGKRQTINAEDVFKALDEIEFPEFVEPLRTALEEFRSKNAARK 176


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