BLASTX nr result
ID: Angelica22_contig00024411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00024411
(719 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003571303.1| PREDICTED: probable pre-mRNA-splicing factor... 78 8e-33
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu... 76 8e-33
ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [S... 76 1e-32
dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group] 76 1e-32
gb|EAY85485.1| hypothetical protein OsI_06862 [Oryza sativa Indi... 76 1e-32
>ref|XP_003571303.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Brachypodium distachyon]
Length = 1249
Score = 77.8 bits (190), Expect(3) = 8e-33
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = +1
Query: 376 SGYFFNCNIFIFPGRTYPVKILYTK*PESDYTDEALITI*QIRLTK 513
SGYFFNCNIF PGRTYPV+ILYTK PESDY D ALIT+ QI LT+
Sbjct: 757 SGYFFNCNIFTIPGRTYPVEILYTKQPESDYLDAALITVLQIHLTE 802
Score = 71.2 bits (173), Expect(3) = 8e-33
Identities = 37/52 (71%), Positives = 39/52 (75%)
Frame = +3
Query: 81 GVLPLTQPVRVATMSEAKRVPEECGCRLGEEDKYAIRFEDCTCLNTVIKYIT 236
G + TQP RVA MS AKRV EE GCRLGEE YAIRFEDCT TVIKY+T
Sbjct: 642 GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMT 693
Score = 38.1 bits (87), Expect(3) = 8e-33
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 233 YSVIML---HERQLMRGQSINVHFRLPKQIA*RRHDLRLIVSSTTLNAVKIQVIF 388
YSV+ML HER + +V F L KQ+ RR D+RLIV+S TL+A K F
Sbjct: 710 YSVVMLDEAHERTI----HTDVLFGLLKQLVKRRPDMRLIVTSATLDAEKFSGYF 760
>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1177
Score = 76.3 bits (186), Expect(3) = 8e-33
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 376 SGYFFNCNIFIFPGRTYPVKILYTK*PESDYTDEALITI*QIRLTK 513
SGYFFNCNIF PGRT+PV+ILYTK PESDY D ALIT+ QI LT+
Sbjct: 685 SGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTE 730
Score = 71.6 bits (174), Expect(3) = 8e-33
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = +3
Query: 81 GVLPLTQPVRVATMSEAKRVPEECGCRLGEEDKYAIRFEDCTCLNTVIKYIT 236
G + TQP RVA MS AKRV EE GCRLGEE YAIRFEDCT +TVIKY+T
Sbjct: 570 GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMT 621
Score = 39.3 bits (90), Expect(3) = 8e-33
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 233 YSVIML---HERQLMRGQSINVHFRLPKQIA*RRHDLRLIVSSTTLNAVKIQVIF 388
YSVIML HER + +V F L KQ+ RR DLRLIV+S TL+A K F
Sbjct: 638 YSVIMLDEAHERTI----HTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYF 688
>ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [Sorghum bicolor]
gi|241922205|gb|EER95349.1| hypothetical protein
SORBIDRAFT_01g044300 [Sorghum bicolor]
Length = 1242
Score = 76.3 bits (186), Expect(3) = 1e-32
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 376 SGYFFNCNIFIFPGRTYPVKILYTK*PESDYTDEALITI*QIRLTK 513
SGYFFNCNIF PGRT+PV+ILYTK PESDY D ALIT+ QI LT+
Sbjct: 750 SGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTE 795
Score = 71.6 bits (174), Expect(3) = 1e-32
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = +3
Query: 81 GVLPLTQPVRVATMSEAKRVPEECGCRLGEEDKYAIRFEDCTCLNTVIKYIT 236
G + TQP RVA MS AKRV EE GCRLGEE YAIRFEDCT +TVIKY+T
Sbjct: 635 GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMT 686
Score = 38.5 bits (88), Expect(3) = 1e-32
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 233 YSVIML---HERQLMRGQSINVHFRLPKQIA*RRHDLRLIVSSTTLNAVKIQVIF 388
YSVIML HER + +V F L KQ+ RR D+RLIV+S TL+A K F
Sbjct: 703 YSVIMLDEAHERTI----HTDVLFGLLKQLIKRRSDMRLIVTSATLDAEKFSGYF 753
>dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]
Length = 1240
Score = 76.3 bits (186), Expect(3) = 1e-32
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 376 SGYFFNCNIFIFPGRTYPVKILYTK*PESDYTDEALITI*QIRLTK 513
SGYFFNCNIF PGRT+PV+ILYTK PESDY D ALIT+ QI LT+
Sbjct: 748 SGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTE 793
Score = 71.6 bits (174), Expect(3) = 1e-32
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = +3
Query: 81 GVLPLTQPVRVATMSEAKRVPEECGCRLGEEDKYAIRFEDCTCLNTVIKYIT 236
G + TQP RVA MS AKRV EE GCRLGEE YAIRFEDCT +TVIKY+T
Sbjct: 633 GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMT 684
Score = 38.5 bits (88), Expect(3) = 1e-32
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 233 YSVIML---HERQLMRGQSINVHFRLPKQIA*RRHDLRLIVSSTTLNAVKIQVIF 388
YSVIML HER + +V F L KQ+ RR D+RLIV+S TL+A K F
Sbjct: 701 YSVIMLDEAHERTI----HTDVLFGLLKQLIKRRSDMRLIVTSATLDAEKFSGYF 751
>gb|EAY85485.1| hypothetical protein OsI_06862 [Oryza sativa Indica Group]
Length = 1240
Score = 76.3 bits (186), Expect(3) = 1e-32
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 376 SGYFFNCNIFIFPGRTYPVKILYTK*PESDYTDEALITI*QIRLTK 513
SGYFFNCNIF PGRT+PV+ILYTK PESDY D ALIT+ QI LT+
Sbjct: 748 SGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTE 793
Score = 71.6 bits (174), Expect(3) = 1e-32
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = +3
Query: 81 GVLPLTQPVRVATMSEAKRVPEECGCRLGEEDKYAIRFEDCTCLNTVIKYIT 236
G + TQP RVA MS AKRV EE GCRLGEE YAIRFEDCT +TVIKY+T
Sbjct: 633 GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMT 684
Score = 38.5 bits (88), Expect(3) = 1e-32
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 233 YSVIML---HERQLMRGQSINVHFRLPKQIA*RRHDLRLIVSSTTLNAVKIQVIF 388
YSVIML HER + +V F L KQ+ RR D+RLIV+S TL+A K F
Sbjct: 701 YSVIMLDEAHERTI----HTDVLFGLLKQLIKRRSDMRLIVTSATLDAEKFSGYF 751