BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024402
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   142   3e-32
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|NP_179581.2| RNA-dependent RNA polymerase-like protein [Arab...   137   1e-30
ref|XP_002883965.1| RNA-dependent RNA polymerase family protein ...   133   1e-29
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   132   3e-29

>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score =  142 bits (358), Expect = 3e-32
 Identities = 77/146 (52%), Positives = 96/146 (65%)
 Frame = +1

Query: 1   VNLDTVHIERIEDIPCQNENGIKVCNEDGDLLIQTDGTSFISEDLARMCPRALLSARYLK 180
           V+L TV+I+RI+D P ++E+G  V +ED   LI TDGT FISEDLA  CP  L   +Y+ 
Sbjct: 331 VDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMN 390

Query: 181 NKKLEMEDDSLEGEQRGEYVKEPPLLMQCRLFYNGCAVKGTFLVNRKLPPRTIQIRPSMI 360
           N   ++ D               PLL+QCRLF NGCAVKGT L+NRKLPPRTIQIRPSMI
Sbjct: 391 NGNSDVCDSRY------------PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMI 438

Query: 361 KVEADPTWKGVRSVNSLEVVNISRKP 438
           KVE DP     ++VNS+E+   S +P
Sbjct: 439 KVETDPKLSDTQTVNSVEINGTSNQP 464


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  139 bits (351), Expect = 2e-31
 Identities = 76/146 (52%), Positives = 94/146 (64%)
 Frame = +1

Query: 1   VNLDTVHIERIEDIPCQNENGIKVCNEDGDLLIQTDGTSFISEDLARMCPRALLSARYLK 180
           V+L TV+I+RI+D P ++E+G  V +ED   LI TDGT FISEDLA  CP  L   +Y+ 
Sbjct: 323 VDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMN 382

Query: 181 NKKLEMEDDSLEGEQRGEYVKEPPLLMQCRLFYNGCAVKGTFLVNRKLPPRTIQIRPSMI 360
           N   +                  PLL+QCRLF NGCAVKGT L+NRKLPPRTIQIRPSMI
Sbjct: 383 NGNSD------------------PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMI 424

Query: 361 KVEADPTWKGVRSVNSLEVVNISRKP 438
           KVE DP     ++VNS+E+   S +P
Sbjct: 425 KVETDPKLSDTQTVNSVEINGTSNQP 450


>ref|NP_179581.2| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
           gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 3;
           Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
           3 gi|330251848|gb|AEC06942.1| RNA-dependent RNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 992

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/146 (46%), Positives = 100/146 (68%)
 Frame = +1

Query: 1   VNLDTVHIERIEDIPCQNENGIKVCNEDGDLLIQTDGTSFISEDLARMCPRALLSARYLK 180
           V++  +  E+I+DI C +++   V +++G   I +DGT +ISEDLARMCP  +   + ++
Sbjct: 369 VDMTGITFEQIDDIHCHDQDDKDVLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSMR 428

Query: 181 NKKLEMEDDSLEGEQRGEYVKEPPLLMQCRLFYNGCAVKGTFLVNRKLPPRTIQIRPSMI 360
           +  ++ ++ + EG+  G   +EPPLL+Q R+FYNG AVKGTFL N+KLPPRT+Q+RPSMI
Sbjct: 429 SNNIQSKNLNFEGQ--GPCGQEPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMI 486

Query: 361 KVEADPTWKGVRSVNSLEVVNISRKP 438
           KV  D T   + + NSLEVV  S  P
Sbjct: 487 KVYEDRTLSNLSTFNSLEVVTTSNPP 512


>ref|XP_002883965.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329805|gb|EFH60224.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 934

 Score =  133 bits (335), Expect = 1e-29
 Identities = 66/146 (45%), Positives = 98/146 (67%)
 Frame = +1

Query: 1   VNLDTVHIERIEDIPCQNENGIKVCNEDGDLLIQTDGTSFISEDLARMCPRALLSARYLK 180
           V++  +  E+I+DI C +++   V +++G   I +DGT +ISEDLARMCP  +   + ++
Sbjct: 394 VDMTGITFEQIDDIHCHDQDNKDVLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSMR 453

Query: 181 NKKLEMEDDSLEGEQRGEYVKEPPLLMQCRLFYNGCAVKGTFLVNRKLPPRTIQIRPSMI 360
           +  ++ +  ++EG+  G   +EPPLL+Q R+F+NG AVKGTFL N+KLPP T+Q+RPSMI
Sbjct: 454 SNNIQSKIPNIEGQ--GPCGQEPPLLIQFRMFHNGYAVKGTFLTNKKLPPWTVQVRPSMI 511

Query: 361 KVEADPTWKGVRSVNSLEVVNISRKP 438
           KV  D T     + NSLEVV  S  P
Sbjct: 512 KVNEDQTMSNFSTFNSLEVVTTSNPP 537


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
           sativus]
          Length = 1056

 Score =  132 bits (332), Expect = 3e-29
 Identities = 75/157 (47%), Positives = 99/157 (63%), Gaps = 11/157 (7%)
 Frame = +1

Query: 1   VNLDTVHIERIEDIPCQNENGIKVCNEDGDLLIQTDGTSFISEDLARMCPRALLSARYLK 180
           ++L TV+++RI DIPC++  G  V   DG  LI TDGT FISEDLA  CP  +   +   
Sbjct: 423 IDLSTVNVQRIGDIPCKDIYG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKH 481

Query: 181 NKKLE-----------MEDDSLEGEQRGEYVKEPPLLMQCRLFYNGCAVKGTFLVNRKLP 327
           +  L+            ++ +L+    G  ++EPPLL+Q RLFYNG AVKGTFL+N++LP
Sbjct: 482 DADLKAIWQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQLP 541

Query: 328 PRTIQIRPSMIKVEADPTWKGVRSVNSLEVVNISRKP 438
           PRTIQIR SMIKVE DP  +   + NSLE+V  S  P
Sbjct: 542 PRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPP 578