BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024382
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...   311   3e-82
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   279   1e-72
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2...   268   3e-69
ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containi...   256   9e-66
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ...   246   7e-63

>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  311 bits (796), Expect = 3e-82
 Identities = 158/212 (74%), Positives = 178/212 (83%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   IDRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSI 181
           +D+AY +MVNKM  KGL DVVSYNTII+ALC AS T++AYK+ EEMG  GI+PDVVTF+I
Sbjct: 305 LDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTI 364

Query: 182 LIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQG 361
           LIKAFLREG  N+AKKLLDQM  LGL  DRV+YT IVDHLCKTG+ GMAHS FCDM+E G
Sbjct: 365 LIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESG 424

Query: 362 ITPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIAC 541
           ITPDVVSYNALING CRASRVS+A+ LYE+M T G  PDE+TFKL+I GLI EKKLS+AC
Sbjct: 425 ITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVAC 484

Query: 542 TVWDQMMEKGFTLDRDVSETLIIAI-SEDAPC 634
            VWDQMMEKGFTLD  VSETL+ AI S DA C
Sbjct: 485 RVWDQMMEKGFTLDGAVSETLVNAIHSNDASC 516



 Score =  115 bits (289), Expect = 2e-23
 Identities = 70/235 (29%), Positives = 116/235 (49%)
 Frame = +2

Query: 2   IDRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSI 181
           +D AY+L V  MR +       YN++I   C+A   ++A  I+  M  NG  PD+VT+++
Sbjct: 200 VDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNV 259

Query: 182 LIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQG 361
           L+     E     A+ L+ +M   G+  D   Y  ++  LCK  R   A+    + +E  
Sbjct: 260 LLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAK 319

Query: 362 ITPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIAC 541
              DVVSYN +I   C AS    A  L+EEM  KG+ PD +TF ++I+  ++E   +IA 
Sbjct: 320 GLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAK 379

Query: 542 TVWDQMMEKGFTLDRDVSETLIIAISEDAPCSKKNG*FCNFLHTSESLKIAGMHA 706
            + DQM   G   DR +  T++  + +       +  FC+ + +  +  +   +A
Sbjct: 380 KLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNA 434



 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 52/188 (27%), Positives = 92/188 (48%)
 Frame = +2

Query: 62  VSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLLDQ 241
           ++Y   I +  +A   +QA K  +EM  +      + ++  I   +R+ R +LA++  D+
Sbjct: 10  LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69

Query: 242 MRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPDVVSYNALINGFCRASR 421
           M   G SL+   Y+  +  LCK     +      DM   G  PD+ +YN  +N  C  ++
Sbjct: 70  MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129

Query: 422 VSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACTVWDQMMEKGFTLDRDVSET 601
           +  AL + + M+ KG  PD +T+ +VI GL +  +   A  +W  M+ KGF+ D      
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189

Query: 602 LIIAISED 625
           L++ +  D
Sbjct: 190 LVLGLCHD 197



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 60/202 (29%), Positives = 94/202 (46%)
 Frame = +2

Query: 2   IDRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSI 181
           ID+A K      +    V  + YN  I  L R S  + A +  + M P G S +  T+S 
Sbjct: 25  IDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSR 84

Query: 182 LIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQG 361
            I    +     L +KLL+ M  LG   D   Y I ++ LC   +  +A      M+E+G
Sbjct: 85  FISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKG 144

Query: 362 ITPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIAC 541
             PD+V+Y  +ING CRA R   A+ ++  M+ KG  PDE   + ++ GL  + K+ +A 
Sbjct: 145 REPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAY 204

Query: 542 TVWDQMMEKGFTLDRDVSETLI 607
            +    M       + +  +LI
Sbjct: 205 ELTVGAMRGRIKFSKSIYNSLI 226



 Score = 70.5 bits (171), Expect = 9e-10
 Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
 Frame = +2

Query: 65  SYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLLDQM 244
           +Y+  I  LC+        K+LE+M   G  PD+  ++I +     E + ++A  ++  M
Sbjct: 81  TYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTM 140

Query: 245 RILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPDVVS-------------- 382
              G   D V YTI+++ LC+ GR   A   + +M+ +G +PD  +              
Sbjct: 141 VEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKV 200

Query: 383 ---------------------YNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLV 499
                                YN+LINGFC+A  +  A  +   M   G  PD +T+ ++
Sbjct: 201 DLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVL 260

Query: 500 IRGLIQEKKLSIACTVWDQMMEKGFTLD 583
           +     E  L  A  +  +M   G   D
Sbjct: 261 LNYCCDELLLEEAENLMKKMERSGVEPD 288


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  279 bits (714), Expect = 1e-72
 Identities = 134/201 (66%), Positives = 164/201 (81%)
 Frame = +2

Query: 5   DRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSIL 184
           D+AY LM NKM  KGL DVVSYNTII+A C+   T  AYK+ EEMG  GI PDVVTF+I 
Sbjct: 307 DKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIF 366

Query: 185 IKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGI 364
           IKAFL +G  N+AKKLLDQM  +GLS D + YT I+DHLCK+G+  MAHS FCDM+EQGI
Sbjct: 367 IKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGI 426

Query: 365 TPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACT 544
           +PDV+S+NALINGFC+ SRVS+A+ LYEEM  +G +PDE+T+KL+I GLI+EKK+SIAC 
Sbjct: 427 SPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACM 486

Query: 545 VWDQMMEKGFTLDRDVSETLI 607
           VW QMM+KGFTLDR +++TLI
Sbjct: 487 VWGQMMDKGFTLDRAIAQTLI 507



 Score =  109 bits (273), Expect = 1e-21
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 3/238 (1%)
 Frame = +2

Query: 2   IDRAYKLMVNKM---RVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVT 172
           +D AY+L+++ M   RVK  +  + YN +I   CRA   ++A  I   M  NG  PD+VT
Sbjct: 200 VDLAYELIIDVMKSGRVK--LSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVT 257

Query: 173 FSILIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMI 352
           +++ +  F  E   + AKKLL  M   G+  D   Y  ++  +CK      A+    + +
Sbjct: 258 YNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKM 317

Query: 353 EQGITPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLS 532
                 DVVSYN +I  FC+    + A  L+EEM  KG+ PD +TF + I+  + +   +
Sbjct: 318 WPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFN 377

Query: 533 IACTVWDQMMEKGFTLDRDVSETLIIAISEDAPCSKKNG*FCNFLHTSESLKIAGMHA 706
           IA  + DQM E G + D     T+I  + +       +  FC+ +    S  +   +A
Sbjct: 378 IAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNA 435



 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 43/185 (23%), Positives = 82/185 (44%)
 Frame = +2

Query: 68  YNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLLDQMR 247
           Y + I    +A   ++A ++ +EM  +      + ++  I   +   R +LA     QM 
Sbjct: 12  YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71

Query: 248 ILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPDVVSYNALINGFCRASRVS 427
             G SL    Y+  +  LCK            DM      PD+ ++N  ++      R+ 
Sbjct: 72  TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131

Query: 428 DALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACTVWDQMMEKGFTLDRDVSETLI 607
            AL ++E+++  G  PD +T+ ++I G+ + KK   A   W  M+ KGF+ D      ++
Sbjct: 132 LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIV 191

Query: 608 IAISE 622
           + + +
Sbjct: 192 VGLCD 196



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 49/190 (25%), Positives = 82/190 (43%)
 Frame = +2

Query: 2   IDRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSI 181
           ID+A ++     +    V  + YN  I  L   S  + A     +MG  G S    T+S 
Sbjct: 25  IDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSR 84

Query: 182 LIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQG 361
            I    +        +LL  M  L    D   + I +  L   GR  +A   F  +++ G
Sbjct: 85  FITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNG 144

Query: 362 ITPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIAC 541
             PDVV+Y  +I+G C+  +   A+  + +M+ KG  PD      ++ GL   +K+ +A 
Sbjct: 145 RKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAY 204

Query: 542 TVWDQMMEKG 571
            +   +M+ G
Sbjct: 205 ELIIDVMKSG 214


>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  268 bits (684), Expect = 3e-69
 Identities = 131/204 (64%), Positives = 159/204 (77%)
 Frame = +2

Query: 5   DRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSIL 184
           D+AY  MV KM  KG  DVVSYNTII+A C  S   +AYK+ EEMG  GI+PDVVTF+IL
Sbjct: 307 DKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTIL 366

Query: 185 IKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGI 364
           IKAFLREG  ++AKKLLD M  +GL  DR+ YT I+DH CK+G+  MAHS FCDM+E+GI
Sbjct: 367 IKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGI 426

Query: 365 TPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACT 544
           TPDVVSYNALINGFC++ RV + + LYE+ML +G  PDE+T+KL+I  L++E KLS AC 
Sbjct: 427 TPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACR 486

Query: 545 VWDQMMEKGFTLDRDVSETLIIAI 616
           VWDQMME+G TLDR +SE LI AI
Sbjct: 487 VWDQMMERGLTLDRGISEMLINAI 510



 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
 Frame = +2

Query: 2   IDRAYKLMVNKMRVKGLVDVVS--YNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTF 175
           +D AY+L++  +   GL +V +  YN +I   CRA   ++A  ++  M   G  PD+VT+
Sbjct: 200 VDLAYELIIGVIS-GGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTY 258

Query: 176 SILIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCD-MI 352
           ++L+     E     A KLL +M    +  D   Y  ++   CK      A+      M+
Sbjct: 259 NVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMV 318

Query: 353 EQGITPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLS 532
            +G   DVVSYN +I  FC  S    A  L+EEM  KG+ PD +TF ++I+  ++E    
Sbjct: 319 PKGFC-DVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSD 377

Query: 533 IACTVWDQMMEKGFTLDRDVSETLIIAISEDAPCSKKNG*FCNFL 667
           +A  + D M   G   DR    T+I    +       +  FC+ +
Sbjct: 378 MAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMV 422



 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 50/185 (27%), Positives = 85/185 (45%)
 Frame = +2

Query: 68  YNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLLDQMR 247
           Y T I +  +A   + A K+ +EM  +      + ++  I   +R  R +LA     +M 
Sbjct: 12  YRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMA 71

Query: 248 ILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPDVVSYNALINGFCRASRVS 427
            LG SL    Y+  +  LC+T       +   DM +    PD+ ++N  +N   R +R  
Sbjct: 72  PLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREE 131

Query: 428 DALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACTVWDQMMEKGFTLDRDVSETLI 607
            AL ++  M+ +G  PD +TF ++I GL + KK   A   W  M++KG   D      L 
Sbjct: 132 SALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALA 191

Query: 608 IAISE 622
           + + +
Sbjct: 192 VGLCD 196



 Score = 74.3 bits (181), Expect = 6e-11
 Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
 Frame = +2

Query: 56  DVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLL 235
           D+ ++N  +  L R +  E A ++   M   G  PDVVTF+I+I    +  + + A +  
Sbjct: 113 DIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFW 172

Query: 236 DQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITP-DVVSYNALINGFCR 412
             M   G+  D      +   LC  G+  +A+     +I  G++    + YNALI+GFCR
Sbjct: 173 LNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCR 232

Query: 413 ASRVSDALVLYEEMLTKGVHPDELTFKLVI 502
           A R+  AL +   M   G  PD +T+ +++
Sbjct: 233 AGRIDKALAMVSFMSRTGCKPDLVTYNVLL 262



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 49/179 (27%), Positives = 76/179 (42%)
 Frame = +2

Query: 2   IDRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSI 181
           ID A K+       +  V  + YN  I  L R S  + A+    +M P G S    T+S 
Sbjct: 25  IDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSR 84

Query: 182 LIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQG 361
            I    +         LL  M  L    D   + I ++ L +  R   A   F  M+E+G
Sbjct: 85  FISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERG 144

Query: 362 ITPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIA 538
             PDVV++  +I+G C+  +   A+  +  ML KG+ PD      +  GL    ++ +A
Sbjct: 145 REPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLA 203


>ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  256 bits (654), Expect = 9e-66
 Identities = 118/205 (57%), Positives = 162/205 (79%)
 Frame = +2

Query: 2   IDRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSI 181
           +DRA+ +MV +M+ KG+ DVVSYNT+I A C+A  T + Y++ EEM   GI PD+VTF+I
Sbjct: 310 VDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369

Query: 182 LIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQG 361
           LI AFLREG  ++ KKLLD+M  + +  D + YT +VDHLCK G+  +AHS F DM+E G
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429

Query: 362 ITPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIAC 541
           + PDV+SYNAL+NGFC+ SRV DA+ L++EM +KG++PDE+T+KL++ GLI+ KK+S+AC
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLAC 489

Query: 542 TVWDQMMEKGFTLDRDVSETLIIAI 616
            VWDQMME+GFTL+R +SETL+ AI
Sbjct: 490 RVWDQMMERGFTLNRHLSETLVNAI 514



 Score =  106 bits (265), Expect = 1e-20
 Identities = 59/186 (31%), Positives = 95/186 (51%)
 Frame = +2

Query: 2   IDRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSI 181
           +D AY+L+V  ++    V+ + YN +I   CR    ++A KI   M   G  PD+VT++I
Sbjct: 205 VDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNI 264

Query: 182 LIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQG 361
           L+     EG  + A +L++ M   G+  D   Y  ++   CK      AH    + ++  
Sbjct: 265 LLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTK 324

Query: 362 ITPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIAC 541
              DVVSYN +I  FC+A R      L+EEM  KG+ PD +TF ++I   ++E    +  
Sbjct: 325 GMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVK 384

Query: 542 TVWDQM 559
            + D+M
Sbjct: 385 KLLDEM 390



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 54/176 (30%), Positives = 89/176 (50%)
 Frame = +2

Query: 56  DVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLL 235
           D+ ++NT +  LCR +  E A ++   M   G  PDVV+++I+I A     R + A K+ 
Sbjct: 118 DIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVW 177

Query: 236 DQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPDVVSYNALINGFCRA 415
            ++   GLS D      +V  LC  GR  +A+     +I+ G+  + + YNALI+GFCR 
Sbjct: 178 RRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRM 237

Query: 416 SRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACTVWDQMMEKGFTLD 583
            RV  A+ +   M   G  PD +T+ +++    +E  +  A  + + M   G   D
Sbjct: 238 GRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPD 293



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
 Frame = +2

Query: 56  DVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLL 235
           DVVSY  II ALC A   ++A K+   +   G+SPD      L+      GR +LA +L+
Sbjct: 153 DVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELV 212

Query: 236 DQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPDVVSYNALINGFCRA 415
             +   G+ ++ ++Y  ++D  C+ GR   A      M   G  PD+V+YN L+N  C  
Sbjct: 213 VGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEE 272

Query: 416 SRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIA-CTVWDQMMEKG 571
             V +A+ L E M   GV PD  ++  +++G  +   +  A   + ++M  KG
Sbjct: 273 GMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKG 325



 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 4/189 (2%)
 Frame = +2

Query: 62  VSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLLDQ 241
           ++Y + I  L +A    QA  + ++M  +      V ++  I   LR  R +LA     +
Sbjct: 11  LAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRR 70

Query: 242 MRI-LGLSLDRVMYTIIVDHLCKTGRT---GMAHSTFCDMIEQGITPDVVSYNALINGFC 409
             I  G SL    Y+  +  LC         + HS   DM   G  PD+ ++N  +N  C
Sbjct: 71  HVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLC 130

Query: 410 RASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACTVWDQMMEKGFTLDRD 589
           R +R+  AL L+  M +KG  PD +++ ++I  L   K+   A  VW ++++KG + D  
Sbjct: 131 RQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYK 190

Query: 590 VSETLIIAI 616
               L++ +
Sbjct: 191 ACVALVVGL 199



 Score = 70.5 bits (171), Expect = 9e-10
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
 Frame = +2

Query: 65  SYNTIIRALCRASCTEQA---YKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLL 235
           +Y+  I ALC A         + +L +M   G  PD+  F+  +    R+ R   A +L 
Sbjct: 83  TYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELF 142

Query: 236 DQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPDVVSYNALINGFCRA 415
             M   G   D V YTII+D LC   R   A   +  +I++G++PD  +  AL+ G C  
Sbjct: 143 HSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSG 202

Query: 416 SRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACTVWDQMMEKGFTLD 583
            RV  A  L   ++  GV  + L +  +I G  +  ++  A  +   M   G   D
Sbjct: 203 GRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPD 258



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 6/188 (3%)
 Frame = +2

Query: 62  VSYNTIIRALCRASCTEQAYKILEE-MGPNGISPDVVTFSILIKAFLREGRPN-----LA 223
           V YN  I  L R S    A+      + P G S    T+S  I A      PN     L 
Sbjct: 46  VDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPFTYSRFISALC--SAPNNINLPLI 103

Query: 224 KKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPDVVSYNALING 403
             LL  M  LG   D   +   ++ LC+  R   A   F  M  +G  PDVVSY  +I+ 
Sbjct: 104 HSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDA 163

Query: 404 FCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACTVWDQMMEKGFTLD 583
            C A R  +A  ++  ++ KG+ PD      ++ GL    ++ +A  +   +++ G  ++
Sbjct: 164 LCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVN 223

Query: 584 RDVSETLI 607
             V   LI
Sbjct: 224 SLVYNALI 231


>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335822|gb|EFH66239.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 517

 Score =  246 bits (629), Expect = 7e-63
 Identities = 124/203 (61%), Positives = 153/203 (75%)
 Frame = +2

Query: 5   DRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSIL 184
           DR Y  M+ +M  +G  DVVSY+T+I   CRAS T++AYK+ EEM   GI  +VVTF+ L
Sbjct: 307 DRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSL 366

Query: 185 IKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGI 364
           IKAFLREG  ++AKKLLDQM  LGLS DR+ YT I+DHLCK+G    A+  F DMIE  I
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEI 426

Query: 365 TPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACT 544
           TPD +SYN+LI+G CR+ RV++A+ L+E+M  K   PDELTFK +I GLI+EKKLS A  
Sbjct: 427 TPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYK 486

Query: 545 VWDQMMEKGFTLDRDVSETLIIA 613
           VWDQMM+KGFTLDRDVS+TLI A
Sbjct: 487 VWDQMMDKGFTLDRDVSDTLIKA 509



 Score =  105 bits (261), Expect = 3e-20
 Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
 Frame = +2

Query: 2   IDRAYKLMVNKMR-VKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFS 178
           +D AY+++  +++  +  + +V YN +I   C+A   E+A  +   M   G  PD+VT++
Sbjct: 200 VDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYN 259

Query: 179 ILIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQ 358
           +L+  +        A+ ++ +M   G+ LD   Y  ++   C+       +S     +E 
Sbjct: 260 VLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEP 319

Query: 359 GITPDVVSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIA 538
               DVVSY+ LI  FCRAS    A  L+EEM  KG+  + +TF  +I+  ++E   S+A
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVA 379

Query: 539 CTVWDQMMEKGFTLDRDVSETLIIAISEDAPCSKKNG*F 655
             + DQM E G + DR    T++  + +     K  G F
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIF 418



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 56/157 (35%), Positives = 79/157 (50%)
 Frame = +2

Query: 68  YNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLLDQMR 247
           YN  I  L + S  E A  I  +M P G S    T+S  I    +  +  L   LL  M 
Sbjct: 47  YNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDME 106

Query: 248 ILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPDVVSYNALINGFCRASRVS 427
            LG   D   + I +D LC+  + G A  TF  M+++G  PDVVSY  LING  RA +V+
Sbjct: 107 TLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166

Query: 428 DALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIA 538
           DA+ ++  M+  GV PD      ++ GL   +K+ +A
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203



 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
 Frame = +2

Query: 23  MVNKMRVKGLV-DVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFL 199
           ++  M   G + D+ ++N  +  LCR +    A +    M   G  PDVV+++ILI    
Sbjct: 101 LLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160

Query: 200 REGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQG-ITPDV 376
           R G+   A ++ + M   G+S D      +V  LC   +  +A+    + I+   +   +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSI 220

Query: 377 VSYNALINGFCRASRVSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACTVWDQ 556
           V YNALI+GFC+A R+  A  L   M   G  PD +T+ +++        L  A  V  +
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTE 280

Query: 557 MMEKGFTLD 583
           M+  G  LD
Sbjct: 281 MVRSGIQLD 289



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 43/185 (23%), Positives = 91/185 (49%)
 Frame = +2

Query: 62  VSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKAFLREGRPNLAKKLLDQ 241
           ++Y + I  L ++   + A ++ +EM  +        ++  I   ++E R  LA+ +   
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69

Query: 242 MRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPDVVSYNALINGFCRASR 421
           M  +G SL    Y+  +  LCK  +  +  +   DM   G  PD+ ++N  ++  CR ++
Sbjct: 70  MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129

Query: 422 VSDALVLYEEMLTKGVHPDELTFKLVIRGLIQEKKLSIACTVWDQMMEKGFTLDRDVSET 601
           V  A+  +  M+ +G  PD +++ ++I GL +  K++ A  +W+ M+  G + D      
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189

Query: 602 LIIAI 616
           L++ +
Sbjct: 190 LVVGL 194



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 32/101 (31%), Positives = 55/101 (54%)
 Frame = +2

Query: 2   IDRAYKLMVNKMRVKGLVDVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSI 181
           +D+AY +  + +  +   D +SYN++I  LCR+    +A K+ E+M      PD +TF  
Sbjct: 411 VDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470

Query: 182 LIKAFLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLC 304
           +I   +RE + + A K+ DQM   G +LDR +   ++   C
Sbjct: 471 IIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
 Frame = +2

Query: 17  KLMVNKMRVKGLV-DVVSYNTIIRALCRASCTEQAYKILEEMGPNGISPDVVTFSILIKA 193
           K ++++M   GL  D + Y TI+  LC++   ++AY I  +M  + I+PD ++++ LI  
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISG 439

Query: 194 FLREGRPNLAKKLLDQMRILGLSLDRVMYTIIVDHLCKTGRTGMAHSTFCDMIEQGITPD 373
             R GR   A KL + M+      D + +  I+  L +  +   A+  +  M+++G T D
Sbjct: 440 LCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLD 499

Query: 374 VVSYNALINGFCRAS 418
               + LI   C  S
Sbjct: 500 RDVSDTLIKASCSMS 514