BLASTX nr result
ID: Angelica22_contig00024305
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00024305
(1649 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 393 e-107
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 393 e-107
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 369 1e-99
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab... 338 2e-90
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 335 2e-89
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 393 bits (1009), Expect = e-107
Identities = 193/362 (53%), Positives = 255/362 (70%), Gaps = 3/362 (0%)
Frame = +2
Query: 569 ILSDNGQISGKVLVYRYPGLHFGDIHVLNAVYLREMEDVVGNAKYGIFFSTKGPRSVASE 748
I+ D+GQ+ G+VLVY++PGLHFGDIHVLNA Y+ +E+ VGNAKY IFF KGPRS+A E
Sbjct: 569 IILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADE 628
Query: 749 IANGDFDGDMYWVSKNNQLLQYFKASSPWTRACPSSNVNHRKPCDYPPDELEHELFKLFL 928
+AN DFDGDMYWVS+N QLLQYF+AS PW R + +V ++P D+ PDELEHELF+LFL
Sbjct: 629 MANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFL 688
Query: 929 NTKNQNIS-MGVAADSWQAWTDRYLTANDD--NEKKQLKAKMLELIDIYYDALDAPKTGK 1099
T+ Q S +G+AAD+W + DR LT DD +EK+ LK KMLEL DIYYDALDAPK+G
Sbjct: 689 TTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGM 748
Query: 1100 KVRVPNQLKPDCYPHYMEKGNDYQSCSVLGKICDAVEKYKIGITLRYEIRRLAFFEHVPI 1279
KV V +LK + +PH+M + + Y S S+LG+I DAVE ++ EI RL F +
Sbjct: 749 KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAV 808
Query: 1280 PDAALKFWKENYDNYRQEMTDALSSRNQSETNLADEVINKYKEIMYGCDDFKETLRSMND 1459
P A L+ WK+ YD YR EM AL +++ A EVINKYK+I+YG +F+E+ R++ D
Sbjct: 809 PQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLED 868
Query: 1460 VHKDALALYHVCYDYAKSKGDVRKCNFVWKVAGHALCHFHATKAKEKCMLYCLPSVLAKI 1639
+ +ALA+YHV Y++ + V CNF W+VAG ALC + K EK M+ C+PSVL ++
Sbjct: 869 IFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMV-CVPSVLRQV 927
Query: 1640 LN 1645
N
Sbjct: 928 FN 929
Score = 85.9 bits (211), Expect = 3e-14
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = +2
Query: 188 GTSDDNFTTANMILSGVPLDDPCVQHRLSHLAILERKGLRDGKLPISDSFFLMGTADPTG 367
G DD+ T MILSG+P+D+P + H LS + ERKGLR GKLP++D F+LMGTADPTG
Sbjct: 502 GEMDDSIVT-RMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTG 560
Query: 368 LLNRDEVCV 394
L DEVC+
Sbjct: 561 TLKSDEVCI 569
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 393 bits (1009), Expect = e-107
Identities = 193/362 (53%), Positives = 255/362 (70%), Gaps = 3/362 (0%)
Frame = +2
Query: 569 ILSDNGQISGKVLVYRYPGLHFGDIHVLNAVYLREMEDVVGNAKYGIFFSTKGPRSVASE 748
I+ D+GQ+ G+VLVY++PGLHFGDIHVLNA Y+ +E+ VGNAKY IFF KGPRS+A E
Sbjct: 583 IILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADE 642
Query: 749 IANGDFDGDMYWVSKNNQLLQYFKASSPWTRACPSSNVNHRKPCDYPPDELEHELFKLFL 928
+AN DFDGDMYWVS+N QLLQYF+AS PW R + +V ++P D+ PDELEHELF+LFL
Sbjct: 643 MANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFL 702
Query: 929 NTKNQNIS-MGVAADSWQAWTDRYLTANDD--NEKKQLKAKMLELIDIYYDALDAPKTGK 1099
T+ Q S +G+AAD+W + DR LT DD +EK+ LK KMLEL DIYYDALDAPK+G
Sbjct: 703 TTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGM 762
Query: 1100 KVRVPNQLKPDCYPHYMEKGNDYQSCSVLGKICDAVEKYKIGITLRYEIRRLAFFEHVPI 1279
KV V +LK + +PH+M + + Y S S+LG+I DAVE ++ EI RL F +
Sbjct: 763 KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAV 822
Query: 1280 PDAALKFWKENYDNYRQEMTDALSSRNQSETNLADEVINKYKEIMYGCDDFKETLRSMND 1459
P A L+ WK+ YD YR EM AL +++ A EVINKYK+I+YG +F+E+ R++ D
Sbjct: 823 PQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLED 882
Query: 1460 VHKDALALYHVCYDYAKSKGDVRKCNFVWKVAGHALCHFHATKAKEKCMLYCLPSVLAKI 1639
+ +ALA+YHV Y++ + V CNF W+VAG ALC + K EK M+ C+PSVL ++
Sbjct: 883 IFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMV-CVPSVLRQV 941
Query: 1640 LN 1645
N
Sbjct: 942 FN 943
Score = 85.9 bits (211), Expect = 3e-14
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = +2
Query: 188 GTSDDNFTTANMILSGVPLDDPCVQHRLSHLAILERKGLRDGKLPISDSFFLMGTADPTG 367
G DD+ T MILSG+P+D+P + H LS + ERKGLR GKLP++D F+LMGTADPTG
Sbjct: 516 GEMDDSIVT-RMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTG 574
Query: 368 LLNRDEVCV 394
L DEVC+
Sbjct: 575 TLKSDEVCI 583
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 369 bits (947), Expect = 1e-99
Identities = 213/491 (43%), Positives = 295/491 (60%), Gaps = 5/491 (1%)
Frame = +2
Query: 182 NHGTSDDNFTTANMILSGVPLDDPCVQHRLSHLAILERKGLRDGKLPISDSFFLMGTADP 361
N+G DD F A MIL+G+PLD+ +Q+RLS L E+K L+ G+L + + ++LMGT DP
Sbjct: 628 NNGEMDD-FLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDP 686
Query: 362 TGLLNRDEVCVXXXXXXXXXXXXXXXA*TNLWLCF*CKYYVGH*LL**FSLACLIS*IYD 541
T L EVCV +Y+
Sbjct: 687 TFTLESGEVCVI---------------------------------------------LYN 701
Query: 542 SQL*CLPLMILSDNGQISGKVLVYRYPGLHFGDIHVLNAVYLREMEDVVGNAKYGIFFST 721
Q+ NG KVLVYR PGLHFGDIHVL A Y+ ++ VVGNAKY IFFS+
Sbjct: 702 GQI----------NG----KVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSS 747
Query: 722 KGPRSVASEIANGDFDGDMYWVSKNNQLLQYFKASSPWTRACPSSNVNHRKPCDYPPDEL 901
KGPRSVA EIA GDFDGDMYWVS+N+QLL+YF+ PW + + V ++KP ++ DEL
Sbjct: 748 KGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADEL 807
Query: 902 EHELFKLFLNTKNQ-NISMGVAADSWQAWTDRYLTANDD--NEKKQLKAKMLELIDIYYD 1072
E+ELFKLFL+T+ Q + + VAAD+W A D++L ++ E+ ++AK+L+LI+IYYD
Sbjct: 808 ENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYD 867
Query: 1073 ALDAPKT-GKKVRVPNQLKPDCYPHYMEKG-NDYQSCSVLGKICDAVEKYKIGITLRYEI 1246
ALDAPK GKK+ VP LK PH+ME+G N Y S S+LG+I D Y+ + E+
Sbjct: 868 ALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTANMYQEEVP-NIEV 926
Query: 1247 RRLAFFEHVPIPDAALKFWKENYDNYRQEMTDALSSRNQSETNLADEVINKYKEIMYGCD 1426
++L FE +P+ WK Y+ YR++M DA+ ++ A+ I KYKEI+YG +
Sbjct: 927 QKLPCFEE-ELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAE 985
Query: 1427 DFKETLRSMNDVHKDALALYHVCYDYAKSKGDVRKCNFVWKVAGHALCHFHATKAKEKCM 1606
+ + + RS +V+++ALA+Y V YD+A S+ VR C F WKVAG AL +A K E+
Sbjct: 986 ELEGSPRSNEEVYQEALAIYQVTYDHAMSR-SVRNCGFAWKVAGSALFKLYAIKHSER-S 1043
Query: 1607 LYCLPSVLAKI 1639
+CLPSV+ +I
Sbjct: 1044 FHCLPSVMREI 1054
>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
polymerase-like protein [Arabidopsis thaliana]
Length = 977
Score = 338 bits (868), Expect = 2e-90
Identities = 176/362 (48%), Positives = 237/362 (65%), Gaps = 5/362 (1%)
Frame = +2
Query: 569 ILSDNGQISGKVLVYRYPGLHFGDIHVLNAVYLREMEDVVGNAKYGIFFSTKGPRSVASE 748
++ ++GQISG+VLVYR PGLHFGDIH+L A Y++ +E+ VGN+K+ +FF KGPRS+ E
Sbjct: 618 VILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDE 677
Query: 749 IANGDFDGDMYWVSKNNQLLQYFKASSPWTRACPSSNVNH-RKPCDYPPDELEHELFKLF 925
IA GDFDGDMY++S+N +LL+ FK S PW P S N R P P+ELE ELF++F
Sbjct: 678 IAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMF 737
Query: 926 LNTK-NQNISMGVAADSWQAWTDRYLTANDD--NEKKQLKAKMLELIDIYYDALDAPKTG 1096
L + + +G+AADSW DR+L DD EK ++K KMLELIDIYYDALDAPK G
Sbjct: 738 LTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKG 797
Query: 1097 KKVRVPNQLKPDCYPHYMEKGNDYQSCSVLGKICDAVEKYKI-GITLRYEIRRLAFFEHV 1273
KV +PN+LKPD +PHYME+ +QS S+LG I D V+ + EI +L FE
Sbjct: 798 DKVYLPNKLKPDIFPHYMERDKKFQSTSILGLIFDFVKSQTTEEPSPSSEISKLPCFEDE 857
Query: 1274 PIPDAALKFWKENYDNYRQEMTDALSSRNQSETNLADEVINKYKEIMYGCDDFKETLRSM 1453
P+ + ++ + YDNYR EMT A+ + N EVI +YK+ YG F+++ +S+
Sbjct: 858 PVSEFHMQKCRLWYDNYRTEMTQAMKTDKDESAN---EVIQRYKQEFYGAAGFEDSKKSL 914
Query: 1454 NDVHKDALALYHVCYDYAKSKGDVRKCNFVWKVAGHALCHFHATKAKEKCMLYCLPSVLA 1633
+++ ALALY + YDYA G V KC FVWKVAG LC F+ K ++ L C PSVL
Sbjct: 915 EELYPQALALYKIVYDYAIHAG-VSKCRFVWKVAGPVLCRFYLNKKMQEKCLVCAPSVLK 973
Query: 1634 KI 1639
++
Sbjct: 974 EL 975
Score = 76.6 bits (187), Expect = 2e-11
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = +2
Query: 182 NHGTSDDNFTTANMILSGVPLDDPCVQHRLSHLAILERKGLRDGKLPISDSFFLMGTADP 361
N+G DD A MIL G+PLD+P +++ LS L E+ L+ GKLP+++S++LMGT DP
Sbjct: 549 NYGEMDDQ-NAAQMILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDP 607
Query: 362 TGLLNRDEVCV 394
TG L DEVCV
Sbjct: 608 TGALKEDEVCV 618
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 335 bits (860), Expect = 2e-89
Identities = 173/362 (47%), Positives = 236/362 (65%), Gaps = 5/362 (1%)
Frame = +2
Query: 569 ILSDNGQISGKVLVYRYPGLHFGDIHVLNAVYLREMEDVVGNAKYGIFFSTKGPRSVASE 748
++ ++GQISG+VLVYR PGLHFGDIH+L A Y++ +E+ VGN+KY +FF KGPRS+ E
Sbjct: 622 VILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKYAVFFPQKGPRSLGDE 681
Query: 749 IANGDFDGDMYWVSKNNQLLQYFKASSPWTRACPSSNVNH-RKPCDYPPDELEHELFKLF 925
IA GDFDGDMY++S+N +LL++FK S PW P S N R P P+ELE ELF++F
Sbjct: 682 IAGGDFDGDMYFISRNPELLEHFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMF 741
Query: 926 LNTK-NQNISMGVAADSWQAWTDRYLTANDD--NEKKQLKAKMLELIDIYYDALDAPKTG 1096
L + + +G+AADSW DR L D+ EK ++K KML+LIDIYYDALDAPK G
Sbjct: 742 LKAGFHASNVIGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLKLIDIYYDALDAPKKG 801
Query: 1097 KKVRVPNQLKPDCYPHYMEKGNDYQSCSVLGKICDAVEKYKI-GITLRYEIRRLAFFEHV 1273
KV +PN+L+PD +PHYME+ ++S S+LG I D V+ T EI +L FE
Sbjct: 802 DKVYLPNELRPDIFPHYMEREKKFKSTSILGLIYDFVKSQTTEEPTPSSEISKLPCFEDE 861
Query: 1274 PIPDAALKFWKENYDNYRQEMTDALSSRNQSETNLADEVINKYKEIMYGCDDFKETLRSM 1453
P+ + ++ + YDNYR EMT A+ + N EVI +YK+ YG F+++ +S+
Sbjct: 862 PVSEFHMEKCRRWYDNYRSEMTQAMKTDKDESAN---EVIQRYKQEFYGAAGFEDSKKSL 918
Query: 1454 NDVHKDALALYHVCYDYAKSKGDVRKCNFVWKVAGHALCHFHATKAKEKCMLYCLPSVLA 1633
+++ AL LY + YDYA G V KC FVWKVAG LC F+ K ++ L C PSVL
Sbjct: 919 EELYPQALTLYKIVYDYAIHAG-VSKCGFVWKVAGPVLCRFYLMKKMQEKSLVCAPSVLK 977
Query: 1634 KI 1639
++
Sbjct: 978 EL 979
Score = 75.5 bits (184), Expect = 4e-11
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +2
Query: 182 NHGTSDDNFTTANMILSGVPLDDPCVQHRLSHLAILERKGLRDGKLPISDSFFLMGTADP 361
N+G DD A MIL G+PLD+P +++ LS L E+ L+ G+LP+++S++LMGT DP
Sbjct: 553 NYGEMDDQ-NAAQMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDP 611
Query: 362 TGLLNRDEVCV 394
TG L DEVCV
Sbjct: 612 TGELKEDEVCV 622