BLASTX nr result

ID: Angelica22_contig00024279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024279
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein...    61   1e-07
dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]                 61   1e-07
ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata sub...    57   1e-06

>ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein [Arabidopsis
           thaliana] gi|75263255|sp|Q9FZ70.1|FDL1_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g13570
           gi|9802755|gb|AAF99824.1|AC027134_6 Unknown protein
           [Arabidopsis thaliana] gi|111074352|gb|ABH04549.1|
           At1g13570 [Arabidopsis thaliana]
           gi|332190914|gb|AEE29035.1| F-box/FBD/LRR-repeat protein
           containing protein [Arabidopsis thaliana]
          Length = 416

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
 Frame = -2

Query: 513 LILGPDPFMFKTLAIKLVNLKMLKLYRIRY-NLCQILNSLRLIRSLPNLQVLKVFLDFQV 337
           L +G DP     L +  ++LK ++LY++ + +  ++L  LRL+   PNL+ LKV      
Sbjct: 269 LSIGDDP---GRLPLTYIHLKTIELYQVCFEDADEVLVLLRLVTHSPNLKELKV------ 319

Query: 336 KSSDPENP-TIEHH---LESLDWKDVLLHQLLTVEICGVVGFRSVHHFTKILLASSPSLR 169
            S+ P  P  +E     L   D+ D  L  L +V+I    G R    F + LL +SP L 
Sbjct: 320 -SASPVQPFPLEEEGFDLFERDYFDYKLPSLESVKITDASGIRYELEFIRFLLGTSPVLE 378

Query: 168 VMSLSCSTTVSDPDEKLRIKRELLQLPRKSLEAQL 64
            +++S S  +SD D K+ +  ELL+ PR S  AQL
Sbjct: 379 TVTVSSS--LSDKDAKMDMVIELLRYPRVSPRAQL 411


>dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]
          Length = 416

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
 Frame = -2

Query: 513 LILGPDPFMFKTLAIKLVNLKMLKLYRIRY-NLCQILNSLRLIRSLPNLQVLKVFLDFQV 337
           L +G DP     L +  ++LK ++LY++ + +  ++L  LRL+   PNL+ LKV      
Sbjct: 269 LSIGDDP---GRLPLTYIHLKTIELYQVCFEDADEVLVLLRLVTHSPNLKELKV------ 319

Query: 336 KSSDPENP-TIEHH---LESLDWKDVLLHQLLTVEICGVVGFRSVHHFTKILLASSPSLR 169
            S+ P  P  +E     L   D+ D  L  L +V+I    G R    F + LL +SP L 
Sbjct: 320 -SASPVQPFPLEEEGFDLFERDYFDYKLPSLESVKITDASGIRYELEFIRFLLGTSPVLE 378

Query: 168 VMSLSCSTTVSDPDEKLRIKRELLQLPRKSLEAQL 64
            +++S S  +SD D K+ +  ELL+ PR S  AQL
Sbjct: 379 TVTVSSS--LSDKDAKMDMVIELLRYPRVSPRAQL 411


>ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338601|gb|EFH69018.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
 Frame = -2

Query: 513 LILGPDPFMFKTLAIKLVNLKMLKLYRIRY-NLCQILNSLRLIRSLPNLQVLKVFLD-FQ 340
           L +G DP     L I  ++LK ++LY++ + +  +IL  LRL+   PNL+ LKV     Q
Sbjct: 269 LSIGDDP---GRLPITYIHLKTIELYQVSFEDANEILVLLRLVTHSPNLKELKVSASPIQ 325

Query: 339 VKSSDPENPTIEHHLESLDWKDVLLHQLLTVEICGVVGFRSVHHFTKILLASSPSLRVMS 160
           +   + E       L   D+ D  L  L TV++  V G R+   F + LL +SP L  + 
Sbjct: 326 LFPLEEEG----FDLFERDYFDYKLPSLETVKMTDVSGIRNELEFIRFLLGTSPVLETVV 381

Query: 159 LSCSTTVSDPDEKLRIKRELLQLPRKSLEAQ 67
           +S S  + D + K+ +  ELL+ PR S  AQ
Sbjct: 382 VSSS--LIDKEAKMDMVIELLRYPRVSPRAQ 410


Top