BLASTX nr result

ID: Angelica22_contig00024043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00024043
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   217   4e-54
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   211   2e-52
ref|XP_003518581.1| PREDICTED: pentatricopeptide repeat-containi...   211   3e-52
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   203   5e-50
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...   203   5e-50

>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic [Vitis vinifera]
          Length = 825

 Score =  217 bits (553), Expect = 4e-54
 Identities = 98/143 (68%), Positives = 119/143 (83%)
 Frame = -3

Query: 1108 DMLGRVGRVVEAYNFVKNLGEEGNVLGIWGSLLAACRTHGEFQLGKIVAKKFYEMERLNN 929
            DMLGRVGRVVEAY FVK LGEEGN  GIWGSLL ACR HGEF+LGK+VA K  EME+ ++
Sbjct: 670  DMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSS 729

Query: 928  MSGYHVLLSNMYAEEGNWESVNRVREGMQDKGLSKEVGCSWIDVAGYINYFVSRDQKHPQ 749
            ++GYHVLLSN+YA EGNW++V+RVR+ M+ KGL KE GCSW++VAG++N F+SRD KHPQ
Sbjct: 730  LTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQ 789

Query: 748  SDNIYTSLEELGINMKDAGYRPC 680
               IY  LE+L + MKDAGY+PC
Sbjct: 790  CAEIYQMLEKLAMEMKDAGYKPC 812


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  211 bits (538), Expect = 2e-52
 Identities = 96/143 (67%), Positives = 116/143 (81%)
 Frame = -3

Query: 1108 DMLGRVGRVVEAYNFVKNLGEEGNVLGIWGSLLAACRTHGEFQLGKIVAKKFYEMERLNN 929
            DMLGRVGRV EAY FVK LGEEGN   IWGSLL ACR HGEF+LGK+VA K  EME+ + 
Sbjct: 670  DMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSX 729

Query: 928  MSGYHVLLSNMYAEEGNWESVNRVREGMQDKGLSKEVGCSWIDVAGYINYFVSRDQKHPQ 749
            ++GYHVLLSN+YA EGNW++V+RVR+ M+ KGL KE GCSW++VAG++N F+SRD KHPQ
Sbjct: 730  LTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQ 789

Query: 748  SDNIYTSLEELGINMKDAGYRPC 680
               IY  LE+L + MKDAGY+PC
Sbjct: 790  CAEIYQMLEKLAMEMKDAGYKPC 812


>ref|XP_003518581.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic [Glycine max]
          Length = 755

 Score =  211 bits (536), Expect = 3e-52
 Identities = 92/144 (63%), Positives = 120/144 (83%)
 Frame = -3

Query: 1108 DMLGRVGRVVEAYNFVKNLGEEGNVLGIWGSLLAACRTHGEFQLGKIVAKKFYEMERLNN 929
            DMLGRVGRVVEAY FV+ LGE+GN + IWGS+L AC+ HG F+LGK++A+K   ME    
Sbjct: 600  DMLGRVGRVVEAYEFVQRLGEDGNAIEIWGSILGACKNHGYFELGKVIAEKLLNMETEKR 659

Query: 928  MSGYHVLLSNMYAEEGNWESVNRVREGMQDKGLSKEVGCSWIDVAGYINYFVSRDQKHPQ 749
            ++GYHVLLSN+YAEEG WE+V+RVR  M++KGL KE+GCSW+++AG +N+FVSRD+KHPQ
Sbjct: 660  IAGYHVLLSNIYAEEGEWENVDRVRNQMKEKGLQKEMGCSWVEIAGCVNFFVSRDEKHPQ 719

Query: 748  SDNIYTSLEELGINMKDAGYRPCN 677
            S  IY  L++L ++MKDAGY+PCN
Sbjct: 720  SGEIYYILDKLTMDMKDAGYKPCN 743


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  203 bits (517), Expect = 5e-50
 Identities = 94/142 (66%), Positives = 118/142 (83%)
 Frame = -3

Query: 1108 DMLGRVGRVVEAYNFVKNLGEEGNVLGIWGSLLAACRTHGEFQLGKIVAKKFYEMERLNN 929
            DMLGR GRV +AY FV  LGE+GNV+ IWGSLLAACR H +F+LGK+VAKK  EME++N 
Sbjct: 662  DMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKING 721

Query: 928  MSGYHVLLSNMYAEEGNWESVNRVREGMQDKGLSKEVGCSWIDVAGYINYFVSRDQKHPQ 749
             +GYHVLLSN+YAEE NWE+V+ VR+ M+++GL KE G SWI++AGY+N+F S+D+KHPQ
Sbjct: 722  KTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQ 781

Query: 748  SDNIYTSLEELGINMKDAGYRP 683
            SD IY+ LEEL + MK AGYRP
Sbjct: 782  SDQIYSMLEELLMEMKHAGYRP 803


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  203 bits (517), Expect = 5e-50
 Identities = 94/142 (66%), Positives = 118/142 (83%)
 Frame = -3

Query: 1108 DMLGRVGRVVEAYNFVKNLGEEGNVLGIWGSLLAACRTHGEFQLGKIVAKKFYEMERLNN 929
            DMLGR GRV +AY FV  LGE+GNV+ IWGSLLAACR H +F+LGK+VAKK  EME++N 
Sbjct: 638  DMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKING 697

Query: 928  MSGYHVLLSNMYAEEGNWESVNRVREGMQDKGLSKEVGCSWIDVAGYINYFVSRDQKHPQ 749
             +GYHVLLSN+YAEE NWE+V+ VR+ M+++GL KE G SWI++AGY+N+F S+D+KHPQ
Sbjct: 698  KTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQ 757

Query: 748  SDNIYTSLEELGINMKDAGYRP 683
            SD IY+ LEEL + MK AGYRP
Sbjct: 758  SDQIYSMLEELLMEMKHAGYRP 779


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