BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00023959
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T14570 cytochrome b559 component psbE - beet chloroplast gi...   182   3e-44
ref|XP_004162281.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b...   169   2e-40
gb|AAS46066.1| cytochrome b559 alpha chain [Oryza sativa Indica ...   169   3e-40
ref|YP_740134.1| photosystem II cytochrome b559 alpha subunit [D...   165   4e-39
ref|YP_001122824.1| photosystem II cytochrome b559 alpha subunit...   164   5e-39

>pir||T14570 cytochrome b559 component psbE - beet chloroplast
           gi|860891|emb|CAA60967.1| PSII cytochome b559 alpha
           chain [Beta vulgaris subsp. vulgaris]
           gi|860897|emb|CAA60972.1| PSII cytochrome b599 alpha
           chain [Beta vulgaris subsp. vulgaris]
          Length = 118

 Score =  182 bits (461), Expect = 3e-44
 Identities = 92/98 (93%), Positives = 93/98 (94%)
 Frame = +1

Query: 19  DPPLTVQEYVELSMSGSTSTRERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYD 198
           D PLTVQEYVELSMSGST   ERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYD
Sbjct: 23  DLPLTVQEYVELSMSGSTG--ERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYD 80

Query: 199 VFGSPRPNEYFTENRQGIPLITGRFDPLEQLDEFSRSF 312
           VFGSPRPNEYFTE+RQGIPLITGRFD LEQLDEFSRSF
Sbjct: 81  VFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF 118


>ref|XP_004162281.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b559 subunit alpha-like
           [Cucumis sativus]
          Length = 132

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/97 (90%), Positives = 89/97 (91%)
 Frame = +1

Query: 22  PPLTVQEYVELSMSGSTSTRERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDV 201
           P LTVQEYVEL MSGST   ERSFADIITSIRYWVIHS  IPSLFIAGWLFVSTGLAYDV
Sbjct: 39  PLLTVQEYVELGMSGSTG--ERSFADIITSIRYWVIHSX-IPSLFIAGWLFVSTGLAYDV 95

Query: 202 FGSPRPNEYFTENRQGIPLITGRFDPLEQLDEFSRSF 312
           FGSPRPNEYFTE+RQGIPLITGRFD LEQLDEFSRSF
Sbjct: 96  FGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF 132


>gb|AAS46066.1| cytochrome b559 alpha chain [Oryza sativa Indica Group]
           gi|42795566|gb|AAS46132.1| cytochrome b559 alpha chain
           [Oryza sativa Japonica Group] gi|42795630|gb|AAS46195.1|
           cytochrome b559 alpha chain [Oryza sativa Japonica
           Group] gi|290790587|gb|ADD62847.1| photosystem II
           cytochrome b559 alpha subunit [Oryza sativa Japonica
           Group] gi|290790656|gb|ADD62915.1| photosystem II
           cytochrome b559 alpha subunit [Oryza meridionalis]
           gi|290790725|gb|ADD62983.1| photosystem II cytochrome
           b559 alpha subunit [Oryza australiensis]
           gi|290790794|gb|ADD63051.1| photosystem II cytochrome
           b559 alpha subunit [Potamophila parviflora]
           gi|290790861|gb|ADD63117.1| photosystem II cytochrome
           b559 alpha subunit [Microlaena stipoides]
          Length = 104

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/97 (88%), Positives = 89/97 (91%)
 Frame = +1

Query: 22  PPLTVQEYVELSMSGSTSTRERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDV 201
           P L VQ++ ELSMSGST   ERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDV
Sbjct: 10  PFLNVQKFGELSMSGSTG--ERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDV 67

Query: 202 FGSPRPNEYFTENRQGIPLITGRFDPLEQLDEFSRSF 312
           FGSPRPNEYFTE+RQGIPLIT RFD LEQLDEFSRSF
Sbjct: 68  FGSPRPNEYFTESRQGIPLITDRFDSLEQLDEFSRSF 104


>ref|YP_740134.1| photosystem II cytochrome b559 alpha subunit [Daucus carota]
           gi|149390459|ref|YP_001294287.1| photosystem II
           cytochrome b559 alpha subunit [Illicium oligandrum]
           gi|323149099|ref|YP_004222663.1| photosystem II
           cytochrome b559 alpha subunit [Anthriscus cerefolium]
           gi|359422161|ref|YP_004935569.1| photosystem II protein
           V (chloroplast) [Eleutherococcus senticosus]
           gi|122233832|sp|Q0G9U5.1|PSBE_DAUCA RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V gi|21633882|gb|AAM55866.1|
           PsbE [Maripa paniculata] gi|113200925|gb|ABI32441.1|
           photosystem II cytochrome b559 alpha subunit [Daucus
           carota] gi|147917412|gb|ABQ52536.1| photosystem II
           cytochrome b559 alpha subunit [Illicium oligandrum]
           gi|156573679|gb|ABU85172.1| photosystem II cytochrome
           b559 alpha subunit [Anethum graveolens]
           gi|289645592|gb|ADD13655.1| photosystem II cytochrome
           b559 alpha subunit [Anthriscus cerefolium]
           gi|347448224|gb|AEO92636.1| photosystem II protein V
           (chloroplast) [Eleutherococcus senticosus]
           gi|372483912|gb|AEX95598.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Doryanthes palmeri]
          Length = 83

 Score =  165 bits (417), Expect = 4e-39
 Identities = 82/85 (96%), Positives = 82/85 (96%)
 Frame = +1

Query: 58  MSGSTSTRERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE 237
           MSGST   ERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE
Sbjct: 1   MSGSTG--ERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE 58

Query: 238 NRQGIPLITGRFDPLEQLDEFSRSF 312
           NRQGIPLITGRFDPLEQLDEFSRSF
Sbjct: 59  NRQGIPLITGRFDPLEQLDEFSRSF 83


>ref|YP_001122824.1| photosystem II cytochrome b559 alpha subunit [Phaseolus vulgaris]
           gi|289066844|ref|YP_003434362.1| photosystem II
           cytochrome b559 alpha subunit [Vigna radiata]
           gi|393396121|ref|YP_006460360.1| photosystem II
           cytochrome b559 alpha subunit (chloroplast) [Vigna
           unguiculata] gi|112030992|gb|ABH88104.1| photosystem II
           cytochrome b559 alpha subunit [Phaseolus vulgaris]
           gi|158187132|gb|ABW22765.1| photosystem II cytochrome
           b559 alpha subunit [Phaseolus vulgaris]
           gi|259020031|gb|ACV90229.1| photosystem II cytochrome
           b559 alpha subunit [Vigna radiata]
           gi|349589869|gb|AEP94840.1| photosystem II cytochrome
           b559 alpha subunit [Vigna unguiculata]
           gi|387598485|gb|AFJ91877.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Vigna unguiculata]
          Length = 83

 Score =  164 bits (416), Expect = 5e-39
 Identities = 81/85 (95%), Positives = 82/85 (96%)
 Frame = +1

Query: 58  MSGSTSTRERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE 237
           MSGST   ERSFADIITSIRYW+IHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE
Sbjct: 1   MSGSTG--ERSFADIITSIRYWIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE 58

Query: 238 NRQGIPLITGRFDPLEQLDEFSRSF 312
           NRQGIPLITGRFDPLEQLDEFSRSF
Sbjct: 59  NRQGIPLITGRFDPLEQLDEFSRSF 83