BLASTX nr result

ID: Angelica22_contig00023892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00023892
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94932.1| unknown [Populus trichocarpa]                          136   2e-30
ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-l...   131   7e-29
ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula...   130   9e-29
ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-l...   128   6e-28
ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28

>gb|ABK94932.1| unknown [Populus trichocarpa]
          Length = 408

 Score =  136 bits (343), Expect = 2e-30
 Identities = 73/116 (62%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   SRALSEMNGKMVGDKPLYVAFAHSKEDRRAGHQQEQYSNMHPVGV-PSXXXXXXXXXXXX 179
           SRAL EMNGKMV  KPLYVA A  KEDRRA   Q Q+S M PV + PS            
Sbjct: 126 SRALLEMNGKMVASKPLYVALAQRKEDRRA-RLQAQFSQMRPVAMAPSVGRMPMYPPTGP 184

Query: 180 XXXQQIFYAQGHPAFIPPQPGFGYPTQLVPCMRPSGAPVPNFFVPMAQLGQQGLRP 347
              QQIFY QG PA +PPQPGFGY  QLVP MRP GAP+PNFFVPM Q GQQG RP
Sbjct: 185 GLGQQIFYGQGPPAIMPPQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQRP 240


>ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 646

 Score =  131 bits (329), Expect = 7e-29
 Identities = 72/117 (61%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   SRALSEMNGKMVGDKPLYVAFAHSKEDRRAGHQQEQYSNMHPVGVPSXXXXXXXXXXXXX 182
           SRAL EMNGKMV  KPLYV  A  KEDRRA   Q Q++ M PVG+P              
Sbjct: 364 SRALLEMNGKMVVSKPLYVTLAQRKEDRRA-RLQAQFAQMRPVGMPPSVGPRVPMYPPGG 422

Query: 183 XX--QQIFYAQGHPAFIPPQPGFGYPTQLVPCMRPSGAPVPNFFVPMAQLGQQGLRP 347
               QQIFYAQG PA IP QPGFGY  QLVP MRP  APVPNFFVPM Q GQQG RP
Sbjct: 423 PGIGQQIFYAQGPPAIIPSQPGFGYQQQLVPGMRPGAAPVPNFFVPMVQQGQQGQRP 479


>ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
           gi|355508977|gb|AES90119.1| Poly(A)-binding protein
           [Medicago truncatula]
          Length = 654

 Score =  130 bits (328), Expect = 9e-29
 Identities = 71/117 (60%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   SRALSEMNGKMVGDKPLYVAFAHSKEDRRAGHQQEQYSNMHPVGVPSXXXXXXXXXXXXX 182
           SRAL EMNGKMV  KPLYV  A  KEDRRA   Q Q++ M PV +P              
Sbjct: 370 SRALLEMNGKMVASKPLYVTLAQRKEDRRA-RLQAQFAQMRPVSMPPSVAPRMPMYPPGG 428

Query: 183 XX--QQIFYAQGHPAFIPPQPGFGYPTQLVPCMRPSGAPVPNFFVPMAQLGQQGLRP 347
               QQIFY QG PA IP QPGFGY  QLVP MRP GAPVPNFFVPM Q GQQG RP
Sbjct: 429 PGMGQQIFYGQGPPAIIPSQPGFGYQQQLVPGMRPGGAPVPNFFVPMVQQGQQGQRP 485


>ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 651

 Score =  128 bits (321), Expect = 6e-28
 Identities = 69/117 (58%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   SRALSEMNGKMVGDKPLYVAFAHSKEDRRAGHQQEQYSNMHPVGVPSXXXXXXXXXXXXX 182
           SRAL EMNGKMV  KPLYV  A  KEDRRA   Q Q++ M PVG+P              
Sbjct: 367 SRALLEMNGKMVVSKPLYVTLAQRKEDRRA-RLQAQFAQMRPVGMPPSVGPRVPMYPPGG 425

Query: 183 XX--QQIFYAQGHPAFIPPQPGFGYPTQLVPCMRPSGAPVPNFFVPMAQLGQQGLRP 347
               QQ+FY+QG PA IP QPGFGY  QL+P MRP  APVPNFFVPM Q GQQG RP
Sbjct: 426 PGIGQQLFYSQGPPAIIPSQPGFGYQQQLMPGMRPGAAPVPNFFVPMVQQGQQGQRP 482


>ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|222847485|gb|EEE85032.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score =  128 bits (321), Expect = 6e-28
 Identities = 72/117 (61%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   SRALSEMNGKMVGDKPLYVAFAHSKEDRRAGHQQEQYSNMHPVGV-PSXXXXXXXXXXXX 179
           SRAL EMNGK+V  KPLYVA A  KEDRRA   Q Q+S M PV + PS            
Sbjct: 361 SRALLEMNGKIVVSKPLYVALAQRKEDRRA-RLQAQFSQMRPVAMAPSVGPRMPMYPPAG 419

Query: 180 XXX-QQIFYAQGHPAFIPPQPGFGYPTQLVPCMRPSGAPVPNFFVPMAQLGQQGLRP 347
               QQIFY Q  PA IPPQPGFGY  QLVP MRP GAP+PNFFVPM Q GQQG RP
Sbjct: 420 PGLGQQIFYGQAPPAIIPPQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQRP 476


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