BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00023850
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   394   e-107
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   386   e-105
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   359   5e-97
ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   358   1e-96
ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymera...   355   1e-95

>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  394 bits (1012), Expect = e-107
 Identities = 196/258 (75%), Positives = 209/258 (81%), Gaps = 5/258 (1%)
 Frame = +2

Query: 134 MASTPMLPPN-AAGNPNFDGNARAAPAPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFAL 310
           MASTPM PPN AAGNPNFDGN  A P PPGTDMTGICFRDQLWLN+YPLDRNLVFDYFAL
Sbjct: 1   MASTPMAPPNPAAGNPNFDGNPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFAL 60

Query: 311 SPFYDWTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEKVTP 490
           SPFYDWTCNNE +R+RSIHPLD SHLSKMTG EY L+EVMEPHLFV RKQKRD PEKVTP
Sbjct: 61  SPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTP 120

Query: 491 MLTYYVLDGSIYQAPQLCNVFASRVGRALYHISKAFTTAASKLEKIGYVDAENESATLVP 670
           MLTYY+LDGSIYQAPQLCNVF +R+GRALYHISKAFTTAASKLEKIGYVDAENE+  L  
Sbjct: 121 MLTYYILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALES 180

Query: 671 KAPKETIDLKEVKRIDHILASLQRKLXXXXXXXXXXXXXXXXKTAEEDNASE----AQAQ 838
           K  KETID KEV R+D ILASLQRKL                 TAE +   E    A+ Q
Sbjct: 181 KVGKETIDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQ 240

Query: 839 VPPLDPILDQGPSKRMKF 892
           +P LDPI+DQGPSKRMKF
Sbjct: 241 LPALDPIIDQGPSKRMKF 258


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  386 bits (991), Expect = e-105
 Identities = 192/253 (75%), Positives = 205/253 (81%), Gaps = 5/253 (1%)
 Frame = +2

Query: 149 MLPPN-AAGNPNFDGNARAAPAPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD 325
           M PPN AAGNPNFDGN  AAP PPGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD
Sbjct: 1   MAPPNPAAGNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD 60

Query: 326 WTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEKVTPMLTYY 505
           WTCNNE +R+RSIHPLD SHLSKMTG EY L+EVMEPHLFV RKQKRD PEKVTPMLTYY
Sbjct: 61  WTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYY 120

Query: 506 VLDGSIYQAPQLCNVFASRVGRALYHISKAFTTAASKLEKIGYVDAENESATLVPKAPKE 685
           +LDGSIYQAPQLCNVF +R+GRALYHISKAFTTAASKLEKIGYVDAENE+  L  K  KE
Sbjct: 121 ILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKE 180

Query: 686 TIDLKEVKRIDHILASLQRKLXXXXXXXXXXXXXXXXKTAEEDNASE----AQAQVPPLD 853
           TID KEV R+D ILASLQRKL                 TAE +   E    A+ Q+P LD
Sbjct: 181 TIDFKEVMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALD 240

Query: 854 PILDQGPSKRMKF 892
           PI+DQGPSKRMKF
Sbjct: 241 PIIDQGPSKRMKF 253


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  359 bits (922), Expect = 5e-97
 Identities = 183/253 (72%), Positives = 199/253 (78%), Gaps = 6/253 (2%)
 Frame = +2

Query: 152 LPPNAAGNPNFDGN--ARAAPAPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD 325
           +PP A    NFDGN  A A P PPGTDMTGICFRDQLWLNTYPLDRNL+FDYFALSPFYD
Sbjct: 4   VPPGA----NFDGNPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYD 59

Query: 326 WTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEKVTPMLTYY 505
           WTCNNE +R++SIHPLDLSHLSKMTG EY L+EV+EP+LFV RKQKRDSPEKVTPMLTYY
Sbjct: 60  WTCNNEQLRLQSIHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYY 119

Query: 506 VLDGSIYQAPQLCNVFASRVGRALYHISKAFTTAASKLEKIGYVDAENESATLVPKAPKE 685
           VLDGSIYQAPQLCNVFA+R+GRALYHISKAFTTAASKLEKIGYVD E E      K  KE
Sbjct: 120 VLDGSIYQAPQLCNVFAARIGRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKE 178

Query: 686 TIDLKEVKRIDHILASLQRKLXXXXXXXXXXXXXXXXKTAEEDNASE----AQAQVPPLD 853
            ID KEVKRIDHILAS+QRKL                 T E +  SE     + Q PP+D
Sbjct: 179 VIDFKEVKRIDHILASIQRKLPPAPPPPPFPEGYVPPATVEAEKGSETRQAVETQPPPVD 238

Query: 854 PILDQGPSKRMKF 892
           PI+DQGP+KRMKF
Sbjct: 239 PIIDQGPAKRMKF 251


>ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
           transcription subunit 6-like [Cucumis sativus]
          Length = 260

 Score =  358 bits (918), Expect = 1e-96
 Identities = 186/261 (71%), Positives = 204/261 (78%), Gaps = 7/261 (2%)
 Frame = +2

Query: 140 STPMLPPNAAGNPNFDGNAR-AAPAPPGTDMT---GICFRDQLWLNTYPLDRNLVFDYFA 307
           +TP  P    G  NF+G    AAP PPGTDMT   GICFRDQLWLNTYPLDRNLVFDYFA
Sbjct: 2   ATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTNLPGICFRDQLWLNTYPLDRNLVFDYFA 61

Query: 308 LSPFYDWTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEKVT 487
           LSPFYDWTCNNE +RMRSIHPLDLS LSKMTGIEY L+EVMEPHLFVFRKQKRD PEKVT
Sbjct: 62  LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVT 121

Query: 488 PMLTYYVLDGSIYQAPQLCNVFASRVGRALYHISKAFTTAASKLEKIGYVDAENESATLV 667
           PMLTYY+LDGSIYQAPQLC+VFA+RV RALY+ISKAFTTA+SKLEKIGYVD+ENES  + 
Sbjct: 122 PMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVK 181

Query: 668 PKAPKETIDLKEVKRIDHILASLQRKLXXXXXXXXXXXXXXXXKTAEEDNASEAQ---AQ 838
           P   KETI+ KEVKR+DHILASLQRKL                 TAE +   E Q   +Q
Sbjct: 182 P--AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQ 239

Query: 839 VPPLDPILDQGPSKRMKF*SI 901
            P  DPI+DQGP+KRMKF S+
Sbjct: 240 QPSADPIIDQGPAKRMKFSSV 260


>ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6-like [Glycine max]
          Length = 252

 Score =  355 bits (910), Expect = 1e-95
 Identities = 178/250 (71%), Positives = 197/250 (78%), Gaps = 7/250 (2%)
 Frame = +2

Query: 164 AAGNPNFDGNARAAPAPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNE 343
           A GN   +G    AP PPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWTCNNE
Sbjct: 4   APGNQMLEGGG-GAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNE 62

Query: 344 TIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEKVTPMLTYYVLDGSI 523
            +RMRS+HPLD+S LSKMTG EY LSEVMEPHLFV RKQKRDSP+KVTPML YYVLDGSI
Sbjct: 63  QLRMRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSI 122

Query: 524 YQAPQLCNVFASRVGRALYHISKAFTTAASKLEKIGY---VDAENESATLVPKAPKETID 694
           YQAPQLCNVFA+R+GRALY+I KAFTTAASKLEKIGY    D+ENE+A L  K  KETID
Sbjct: 123 YQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETID 182

Query: 695 LKEVKRIDHILASLQRKLXXXXXXXXXXXXXXXXKTAEEDNASE----AQAQVPPLDPIL 862
           +KEVKR+DHILASLQRKL                 TAE +  +E    A+ Q P  DPI+
Sbjct: 183 IKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPII 242

Query: 863 DQGPSKRMKF 892
           DQGP+KRMKF
Sbjct: 243 DQGPAKRMKF 252