BLASTX nr result

ID: Angelica22_contig00023454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00023454
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529293.1| ring finger protein, putative [Ricinus commu...   143   2e-32
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]   139   4e-31
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...   138   7e-31
ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|NP_199155.1| RING-H2 finger protein ATL16 [Arabidopsis thali...   131   8e-29

>ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
           gi|223531217|gb|EEF33062.1| ring finger protein,
           putative [Ricinus communis]
          Length = 376

 Score =  143 bits (360), Expect = 2e-32
 Identities = 73/103 (70%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 FPXXXXXXXXILATAFLLLGYYIFVIKCCLNWHRIDILGRFSLSRNRRNDDPLMGYTPAI 129
           FP        ILATAFLL+ YYIFVIKCCLNWHRIDIL RFSLSRNR  +DPLMGY+PA+
Sbjct: 38  FPIIAIAIIGILATAFLLVSYYIFVIKCCLNWHRIDILRRFSLSRNRNQEDPLMGYSPAM 97

Query: 128 ESRGLDESVIRSIPIFQFKKIEKEDPE-KGISFSECAVCLNEF 3
           E+RGLDESVIRSIPIF+FKK      +  G + SECAVCLNEF
Sbjct: 98  ENRGLDESVIRSIPIFKFKKEGNGSGDIGGRTLSECAVCLNEF 140


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score =  139 bits (349), Expect = 4e-31
 Identities = 83/142 (58%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
 Frame = -3

Query: 419 MDLMSIN--IHVSQSLSQIKXXXXXXXXXXXXXXXXXNGFPXXXXXXXXILATAFLLLGY 246
           MDL+S +  IH SQ+ S IK                   FP        ILATAFLL+ Y
Sbjct: 68  MDLVSTDSSIHGSQAFSPIKSQASSVLPSPSHSSDT--SFPIIAIAVIGILATAFLLVSY 125

Query: 245 YIFVIKCCLNWHRIDILGRFSLSRNRRNDDPLMGYTPAIESRGLDESVIRSIPIFQFKK- 69
           YIFVIKCCLNWHRID+L RFS SR+R  +DPLM Y+PAIESRGLDESVIRSIPIFQF+K 
Sbjct: 126 YIFVIKCCLNWHRIDLLRRFSFSRSRHREDPLMVYSPAIESRGLDESVIRSIPIFQFRKG 185

Query: 68  IEKEDPEKGISFSECAVCLNEF 3
             +E  E+  S  ECAVCLNEF
Sbjct: 186 GGREFGER--SHCECAVCLNEF 205


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score =  138 bits (347), Expect = 7e-31
 Identities = 83/142 (58%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
 Frame = -3

Query: 419 MDLMSIN--IHVSQSLSQIKXXXXXXXXXXXXXXXXXNGFPXXXXXXXXILATAFLLLGY 246
           MDL+S +  IH SQ+ S IK                   FP        ILATAFLL+ Y
Sbjct: 8   MDLVSTDSSIHGSQAFSPIKSQASSVLPSPSHSSDT--SFPIIAIAVIGILATAFLLVSY 65

Query: 245 YIFVIKCCLNWHRIDILGRFSLSRNRRNDDPLMGYTPAIESRGLDESVIRSIPIFQFKK- 69
           YIFVIKCCLNWHRID+L RFS SR+R  +DPLM Y+PAIESRGLDESVIRSIPIFQF+K 
Sbjct: 66  YIFVIKCCLNWHRIDLLRRFSFSRSRHPEDPLMVYSPAIESRGLDESVIRSIPIFQFRKG 125

Query: 68  IEKEDPEKGISFSECAVCLNEF 3
             +E  E+  S  ECAVCLNEF
Sbjct: 126 GGREFGER--SHCECAVCLNEF 145


>ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|222863675|gb|EEF00806.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  135 bits (341), Expect = 3e-30
 Identities = 72/104 (69%), Positives = 79/104 (75%), Gaps = 2/104 (1%)
 Frame = -3

Query: 308 FPXXXXXXXXILATAFLLLGYYIFVIKCCLNWHRIDILGRFSLSRNRRNDDPLMGYTP-A 132
           FP        ILATA LL+ YYIFVIKCCLNWHRID+L RFSLSRNR ++DPLM Y+P A
Sbjct: 22  FPIIAIAIIGILATALLLVSYYIFVIKCCLNWHRIDLLRRFSLSRNRNHEDPLMAYSPSA 81

Query: 131 IESRGLDESVIRSIPIFQFKKIEKEDPEKG-ISFSECAVCLNEF 3
           IESRGLDESVIRSIP+F+FKK        G  SF ECAVCLNEF
Sbjct: 82  IESRGLDESVIRSIPVFKFKKEGNNVRNVGERSFCECAVCLNEF 125


>ref|NP_199155.1| RING-H2 finger protein ATL16 [Arabidopsis thaliana]
           gi|68565310|sp|Q9LSW9.1|ATL16_ARATH RecName:
           Full=RING-H2 finger protein ATL16
           gi|8843895|dbj|BAA97421.1| unnamed protein product
           [Arabidopsis thaliana] gi|30725342|gb|AAP37693.1|
           At5g43420 [Arabidopsis thaliana]
           gi|110736470|dbj|BAF00203.1| hypothetical protein
           [Arabidopsis thaliana] gi|332007576|gb|AED94959.1|
           RING-H2 finger protein ATL16 [Arabidopsis thaliana]
          Length = 375

 Score =  131 bits (329), Expect = 8e-29
 Identities = 72/113 (63%), Positives = 82/113 (72%), Gaps = 11/113 (9%)
 Frame = -3

Query: 308 FPXXXXXXXXILATAFLLLGYYIFVIKCCLNWHRIDILGRFSLSRNRRND-DPLMGYTPA 132
           FP        ILATAFLL+ YY+FVIKCCLNWHRIDILGRFSLSR RRND DPLM Y+P 
Sbjct: 34  FPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSPE 93

Query: 131 IESRGLDESVIRSIPIFQFKKI----------EKEDPEKGISFSECAVCLNEF 3
           + SRGLDESVIR+IPIF+FKK           E E+ E+  S  EC+VCL+EF
Sbjct: 94  LRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRS-QECSVCLSEF 145


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