BLASTX nr result

ID: Angelica22_contig00023453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00023453
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    78   1e-12
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    73   4e-11
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ...    71   1e-10
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]         71   1e-10
emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]    69   4e-10

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 45/115 (39%), Positives = 60/115 (52%)
 Frame = +1

Query: 4    KIESVAYKLELPATSRVHPVFHVSQLKKAVDQARVHRQLPQVNEHGVFELKPSRXXXXXX 183
            ++ +VAYKL+LP  SRVH VFHVS LKKAV        LP + E     ++P        
Sbjct: 1156 RVGAVAYKLKLPEGSRVHSVFHVSLLKKAVGNYHEEENLPDLEEDKGVVIEPETVLTRRT 1215

Query: 184  XXXXXXXXYQVLIQWQGCSVDEATCEDEDLLQSNFPDFLQSSRGHELLEGGRDVR 348
                     QVL+ W G  V+EAT ED  +++S FP+F    +   +L GG  VR
Sbjct: 1216 IQVQGEKIDQVLVHWMGQKVEEATWEDTLIIRSQFPNFYLEDKA--MLSGGSIVR 1268


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
 Frame = +1

Query: 1    DKIESVAYKLELPATSRVHPVFHVSQLKKAVDQARV-HRQLPQVNEHGVFELKPSRXXXX 177
            ++I  VAYKL+L   SR+HPVFHVS LKK + +  + + +LP + E GV  L+P +    
Sbjct: 1229 ERIGPVAYKLKLSPGSRIHPVFHVSLLKKKIGEVAIANDELPPLTEEGVIRLQPRKVLST 1288

Query: 178  XXXXXXXXXXYQVLIQWQGCSVDEATCEDEDLLQSNFPDFLQSSRGHELLEGGR 339
                       + L+ W+G   +EAT ED   L  +FP+     + +  L+ GR
Sbjct: 1289 RWVNKGSTSASESLVLWEGLPEEEATWEDSQQLLRSFPNLNLEDKDYWWLDLGR 1342


>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1548

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
 Frame = +1

Query: 7    IESVAYKLELPATSRVHPVFHVSQLKKAV-DQARVHRQLPQVNEHGVFELKPSRXXXXXX 183
            + SVAY+L+LPA S +HPVFHVSQLK  V D   V  QLP   +  + +L PS       
Sbjct: 1433 VGSVAYRLKLPADSLIHPVFHVSQLKSFVPDTKPVFAQLPTAAQLDIADLIPSAVLERRL 1492

Query: 184  XXXXXXXXYQVLIQWQGCSVDEATCEDEDLLQSNFPDFLQSSRGHELLEGGRDV 345
                     QVL+QW       AT ED D++++ FPD +  + G   + GG  V
Sbjct: 1493 VKKGNAAIVQVLVQWGSLPPALATWEDYDVVRTRFPDAV--AWGQAPIGGGEPV 1544


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/100 (40%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1    DKIESVAYKLELPATSRVHPVFHVSQLKKAVDQARV-HRQLPQVNEHGVFELKPSRXXXX 177
            +K+  VAYKL+LP  S +HPVFHVSQLKK +    V    LP V   G  + +P      
Sbjct: 1485 EKVGRVAYKLQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKR 1544

Query: 178  XXXXXXXXXXYQVLIQWQGCSVDEATCEDEDLLQSNFPDF 297
                       Q L+ W   S  EAT ED  ++QS FP F
Sbjct: 1545 RMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMFPSF 1584


>emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]
          Length = 1258

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1    DKIESVAYKLELPATSRVHPVFHVSQLKKAVDQARVHRQLPQV-NEHGVFELKPSRXXXX 177
            ++I  V YKLELP++  +HPVFHVSQLK  +  A + +    V  +   + ++P +    
Sbjct: 1137 EQIAPVVYKLELPSSETIHPVFHVSQLKWTLGSADLCQPFSLVLADDSEWRVEPDQVLDI 1196

Query: 178  XXXXXXXXXXYQVLIQWQGCSVDEATCEDEDLLQSNFPDFLQSSRGHELLEGGRDVRKTM 357
                       +VLIQW+G    EA+ E  D ++ +FPDF    +   L+EGG D   T 
Sbjct: 1197 RQSPNNNQPDIEVLIQWKGLPQFEASWELVDTIKKHFPDFHLEDK-VSLIEGGNDRPPTR 1255

Query: 358  C 360
            C
Sbjct: 1256 C 1256


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