BLASTX nr result

ID: Angelica22_contig00023299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00023299
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   166   6e-39
ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|2...   159   4e-37
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   158   9e-37
ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containi...   154   1e-35
emb|CBI38165.3| unnamed protein product [Vitis vinifera]              152   6e-35

>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  166 bits (419), Expect = 6e-39
 Identities = 76/107 (71%), Positives = 94/107 (87%)
 Frame = -3

Query: 707 ACKEYHDIELGKFVAEKLMELDPDNSAPYVLLSNMYAELGNWKEVIRVRTLMRKRGVIKQ 528
           ACK + +IELGK+VAEKLME+DP NS PYVLLSNMYAELG WK+V+RVR  MR+RGVIKQ
Sbjct: 569 ACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQ 628

Query: 527 PGCSWIEIQSQVNTFMVKDKRHPKKKEIYLLLNVLTKMLRMSGYIPD 387
           PGCSWIEIQS+V+ FMVKDKRHP KK+I+L+L  LT+ ++ +GY+P+
Sbjct: 629 PGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPE 675


>ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|222853423|gb|EEE90970.1|
           predicted protein [Populus trichocarpa]
          Length = 710

 Score =  159 bits (403), Expect = 4e-37
 Identities = 70/107 (65%), Positives = 90/107 (84%)
 Frame = -3

Query: 707 ACKEYHDIELGKFVAEKLMELDPDNSAPYVLLSNMYAELGNWKEVIRVRTLMRKRGVIKQ 528
           ACK + +I LGK+VAEK+ E+DP +S PYVLL+NMY+ELG W + + VR LMR+RGV+KQ
Sbjct: 574 ACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQ 633

Query: 527 PGCSWIEIQSQVNTFMVKDKRHPKKKEIYLLLNVLTKMLRMSGYIPD 387
           PGCSWI+IQS V+ FMVKDKRHP+KKEIY +L +LTK +R +GY+PD
Sbjct: 634 PGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPD 680


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  158 bits (400), Expect = 9e-37
 Identities = 71/107 (66%), Positives = 90/107 (84%)
 Frame = -3

Query: 707 ACKEYHDIELGKFVAEKLMELDPDNSAPYVLLSNMYAELGNWKEVIRVRTLMRKRGVIKQ 528
           ACK + +I LGK+VAE+L+E+DP NS PYVLLSNMYAELG WK+V+RVR  MR+ GVIKQ
Sbjct: 569 ACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQ 628

Query: 527 PGCSWIEIQSQVNTFMVKDKRHPKKKEIYLLLNVLTKMLRMSGYIPD 387
           PGCSWI IQS ++ FMVKDKRHP KK+IYL+L +LT+ ++  GY+P+
Sbjct: 629 PGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPE 675


>ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
           gi|449523485|ref|XP_004168754.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  154 bits (390), Expect = 1e-35
 Identities = 66/106 (62%), Positives = 90/106 (84%)
 Frame = -3

Query: 707 ACKEYHDIELGKFVAEKLMELDPDNSAPYVLLSNMYAELGNWKEVIRVRTLMRKRGVIKQ 528
           ACK + +I+LG++V +KL+E+DP+NS PYVLLSNMYAE  +WK V+RVR LMR+RGV+KQ
Sbjct: 569 ACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQ 628

Query: 527 PGCSWIEIQSQVNTFMVKDKRHPKKKEIYLLLNVLTKMLRMSGYIP 390
           PGCSWIEIQ ++N FMVKDKRH +KKEIY++L  + + ++ +GY+P
Sbjct: 629 PGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVP 674


>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  152 bits (384), Expect = 6e-35
 Identities = 68/107 (63%), Positives = 89/107 (83%)
 Frame = -3

Query: 707 ACKEYHDIELGKFVAEKLMELDPDNSAPYVLLSNMYAELGNWKEVIRVRTLMRKRGVIKQ 528
           ACK + +IE+GK  AEKL+E+DP NS PYVLLSNMYAELG W +V+RVR LMR++GV KQ
Sbjct: 534 ACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQ 593

Query: 527 PGCSWIEIQSQVNTFMVKDKRHPKKKEIYLLLNVLTKMLRMSGYIPD 387
           PGCSWIE++S+V+ F+VKDK HP +K+IY +L +LT+ ++  GYIPD
Sbjct: 594 PGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 640


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