BLASTX nr result

ID: Angelica22_contig00023206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00023206
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144175.1| PREDICTED: pentatricopeptide repeat-containi...    59   6e-07
gb|AEL98770.1| pentatricopeptide repeat-containing protein, part...    59   8e-07
ref|XP_002315005.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-07
gb|AEL98769.1| pentatricopeptide repeat-containing protein, part...    58   1e-06
ref|XP_002893403.1| pentatricopeptide repeat-containing protein ...    58   1e-06

>ref|XP_004144175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Cucumis sativus]
           gi|449489211|ref|XP_004158247.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = -1

Query: 203 DLSKENPEFRFTSALNCIILYNANIKNEVEAHNVFDAITDAFGSTPNIDSYNAMILAYKN 24
           +LS+ +P ++  +ALNC+IL  ANI +   A+  F+AI  +FG TPNI SYNA++ A+  
Sbjct: 448 NLSRADPPYKSVAALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPNIHSYNALMYAFGR 507

Query: 23  VNK 15
           + K
Sbjct: 508 LKK 510


>gb|AEL98770.1| pentatricopeptide repeat-containing protein, partial [Silene
           latifolia]
          Length = 594

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 26/66 (39%), Positives = 44/66 (66%)
 Frame = -1

Query: 203 DLSKENPEFRFTSALNCIILYNANIKNEVEAHNVFDAITDAFGSTPNIDSYNAMILAYKN 24
           +LS+ +P ++  +ALNC++L  AN  +   A+  F+AI+  FG TPNI SYNA++ A+  
Sbjct: 429 NLSRADPPYKSVAALNCVVLGCANTWDLDRAYQTFEAISSGFGLTPNIHSYNALMYAFGK 488

Query: 23  VNKVKQ 6
           + K ++
Sbjct: 489 LRKAEE 494


>ref|XP_002315005.1| predicted protein [Populus trichocarpa] gi|222864045|gb|EEF01176.1|
           predicted protein [Populus trichocarpa]
          Length = 608

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = -1

Query: 203 DLSKENPEFRFTSALNCIILYNANIKNEVEAHNVFDAITDAFGSTPNIDSYNAMILAYKN 24
           +LS+    ++  +ALNCIIL  ANI +   A+  F+AI+ +FG TPNI SYNA+I A+  
Sbjct: 439 NLSRAESPYKSVAALNCIILGCANIWDLDRAYQTFEAISSSFGLTPNIHSYNALIFAFGR 498

Query: 23  VNK 15
           + K
Sbjct: 499 LKK 501


>gb|AEL98769.1| pentatricopeptide repeat-containing protein, partial [Silene
           latifolia]
          Length = 594

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/66 (39%), Positives = 44/66 (66%)
 Frame = -1

Query: 203 DLSKENPEFRFTSALNCIILYNANIKNEVEAHNVFDAITDAFGSTPNIDSYNAMILAYKN 24
           +LS+ +P ++  +ALNC++L  AN  +   A+  F+AI+  FG TPNI SYNA++ A+  
Sbjct: 429 NLSRADPPYKSVAALNCVVLGCANSWDLDRAYQTFEAISSGFGLTPNIHSYNALMYAFGK 488

Query: 23  VNKVKQ 6
           + K ++
Sbjct: 489 LRKAEE 494


>ref|XP_002893403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339245|gb|EFH69662.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 630

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -1

Query: 200 LSKENPEFRFTSALNCIILYNANIKNEVEAHNVFDAITDAFGSTPNIDSYNAMILAYKNV 21
           LS+ +  ++  +ALNCIIL  AN  +   A+  F+AI+ +FG TPNIDSYNA++ A+  V
Sbjct: 459 LSRGDTPYKSVAALNCIILGCANTWDLDRAYQTFEAISASFGLTPNIDSYNALLYAFGKV 518

Query: 20  NK 15
            K
Sbjct: 519 KK 520


Top