BLASTX nr result

ID: Angelica22_contig00023142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00023142
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   362   1e-97
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   352   1e-94
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   350   3e-94
ref|XP_002333134.1| predicted protein [Populus trichocarpa] gi|2...   348   1e-93
ref|XP_002331841.1| predicted protein [Populus trichocarpa] gi|2...   333   5e-89

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  362 bits (928), Expect = 1e-97
 Identities = 192/336 (57%), Positives = 235/336 (69%), Gaps = 2/336 (0%)
 Frame = +3

Query: 195  MGVVTVSSSAA--RTPLGSTTRLSKYSFPTKRTSISMFKTDKTKNKALAAPKDAVSSAIE 368
            MGVVTVSSSA+  RTP G   + S +  P +R  +  FK DK KN AL  P + +   IE
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 369  KSKGKPKILRQTKKPLERVQAFSVAEAPSCPLDLDYYEAAAKLENIYKRSPAPELYDGQD 548
             SK   K LR+  KP +RV+A S  E   C ++LDY EAAAKLENIYK SPA ++ + +D
Sbjct: 61   TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120

Query: 549  KDHGAKTVXXXXXXXIDEDEKTANKSIDNVVRSQKTDSKRLNLKKRIELRMNREAEAQSA 728
             +   +            D+K   +  DNVVR      KRL+L+KRI L   ++ +A ++
Sbjct: 121  LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180

Query: 729  ARKRKLTGENEIEKINRLVREYSVSTDLVSFDWKKMKIPPVLSSSEHTWLFKLMQPMKAI 908
             +K++   +NE E I+ LVREYS STDLVS DWKKMKIPPVL  SEH WLFKLMQPMK +
Sbjct: 181  IQKKR-DSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239

Query: 909  LMVKDNLRNDLGREPTDGELAQATGMNVVQLRKQIAVGQAARSKLIKHNLRFIMFVMNKY 1088
            L VKDNL+ DLGREPTDGELA+A  M+ VQ+R+ + VGQAAR+KLIKHNLR ++FV+NKY
Sbjct: 240  LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299

Query: 1089 FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRRLRL 1196
            FQEFANGPKFQDLCQAGVKGLITAIDRFEPKR  RL
Sbjct: 300  FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRL 335


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  352 bits (902), Expect = 1e-94
 Identities = 192/340 (56%), Positives = 243/340 (71%), Gaps = 6/340 (1%)
 Frame = +3

Query: 195  MGVVTVSSSAARTPLGSTTRLSKYSFPTKRTSISMFKTDKTKNKALAAPKDAVSSAIEKS 374
            MGVVTVSS+AARTP     + S +S   KR SI  FK DK  N  L +P + V+  +E +
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 375  KGKPKILRQTKKPLERVQAFSVAEAPSCPLDLDYYEAAAKLENIYKRSPAPELYDGQDKD 554
              + K    T KPL+RV+A  + EA  C LDLDY EAAAKLENI+K SP  E  D + KD
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 555  HGAKTVXXXXXXXIDEDEKTANKSIDNVVRSQKTDSKRLNLKKRIELR------MNREAE 716
              +K             +K+AN+  D +VR+Q    KRL+L KRI L+       N+E +
Sbjct: 121  GRSKRGQK-------RSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGK 173

Query: 717  AQSAARKRKLTGENEIEKINRLVREYSVSTDLVSFDWKKMKIPPVLSSSEHTWLFKLMQP 896
            A  + RK+K T +NE ++I+RLVR+YS STDLVS DWKKMKIPPVL SSEHT LFKL+QP
Sbjct: 174  AVPSLRKQKET-KNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQP 232

Query: 897  MKAILMVKDNLRNDLGREPTDGELAQATGMNVVQLRKQIAVGQAARSKLIKHNLRFIMFV 1076
            MKA++ V++ L+  LGREPT+GELA AT MNV+Q+R+Q+ VG+AAR+KLIKHNLR ++FV
Sbjct: 233  MKALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFV 292

Query: 1077 MNKYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRRLRL 1196
            +NKYF++FA+GPKFQDLCQAGVKGLITAIDRFEPKR+ RL
Sbjct: 293  INKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRL 332


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  350 bits (899), Expect = 3e-94
 Identities = 190/338 (56%), Positives = 241/338 (71%), Gaps = 4/338 (1%)
 Frame = +3

Query: 195  MGVVTVSSSAARTPLGSTTRLSKYSFPTKRTSISMFKTDKTKNKALAAPKDAVSSAIEKS 374
            MGVVTVSS+AARTP     + S +S   KR SI  FK DK  N  L +P + V+  +E +
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 375  KGKPKILRQTKKPLERVQAFSVAEAPSCPLDLDYYEAAAKLENIYKRSPAPELYDGQDKD 554
              + K    T KPL+RV+A  + EA  C LDLDY EAAAKLENI+K SP  E  D + KD
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 555  HGAKTVXXXXXXXIDEDEKTANKSIDNVVRSQKTDSKRLNLKKRIELRMNREAEAQSAAR 734
              +K             +K+AN+  D +VR+Q    KRL+L KRI L+  +E +A +  R
Sbjct: 121  GRSKRGQK-------RSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLR 173

Query: 735  KRKLT----GENEIEKINRLVREYSVSTDLVSFDWKKMKIPPVLSSSEHTWLFKLMQPMK 902
            K+K T     E + ++I+RLVR+YS STDLVS DWKKMKIPPVL SSEHT LFKL+QPMK
Sbjct: 174  KQKDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMK 233

Query: 903  AILMVKDNLRNDLGREPTDGELAQATGMNVVQLRKQIAVGQAARSKLIKHNLRFIMFVMN 1082
            A++ V++ L+  LGREPT+GELA AT MNV+Q+R+Q+ VG+AAR+KLIKHNLR ++FV+N
Sbjct: 234  ALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVIN 293

Query: 1083 KYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRRLRL 1196
            KYF++FA+GPKFQDLCQAGVKGLITAIDRFEPKR+ RL
Sbjct: 294  KYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRL 331


>ref|XP_002333134.1| predicted protein [Populus trichocarpa] gi|222834948|gb|EEE73397.1|
            predicted protein [Populus trichocarpa]
          Length = 512

 Score =  348 bits (894), Expect = 1e-93
 Identities = 190/334 (56%), Positives = 242/334 (72%)
 Frame = +3

Query: 195  MGVVTVSSSAARTPLGSTTRLSKYSFPTKRTSISMFKTDKTKNKALAAPKDAVSSAIEKS 374
            MGVV+VSSSA+RTPLG +T+ S Y    KR  I  FK DK+ N +L AP + +   +E +
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60

Query: 375  KGKPKILRQTKKPLERVQAFSVAEAPSCPLDLDYYEAAAKLENIYKRSPAPELYDGQDKD 554
            KGK K L ++KK   R++A     +P C L +DY EAAAKLENIYK SP  +  D +D  
Sbjct: 61   KGK-KRLGKSKKSSNRLKAVRTEVSP-CTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118

Query: 555  HGAKTVXXXXXXXIDEDEKTANKSIDNVVRSQKTDSKRLNLKKRIELRMNREAEAQSAAR 734
               +          +  ++T +++   +VR++   +KRL+L+KRI LR+  E +  S+A 
Sbjct: 119  GVIRRGRQRKRKISEGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178

Query: 735  KRKLTGENEIEKINRLVREYSVSTDLVSFDWKKMKIPPVLSSSEHTWLFKLMQPMKAILM 914
            KRK   +NE EKI+ LVREYS STDLVS DWKKMKIPPVL+SSEH WLFKLMQPMKA+L 
Sbjct: 179  KRK-DRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQ 237

Query: 915  VKDNLRNDLGREPTDGELAQATGMNVVQLRKQIAVGQAARSKLIKHNLRFIMFVMNKYFQ 1094
            VK++L+ +LG EPTD ELA+A  M+V+Q+RKQIAVG+AAR+KLIKHNLR ++FV+ KYFQ
Sbjct: 238  VKEHLQENLGGEPTDVELAKAINMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQ 297

Query: 1095 EFANGPKFQDLCQAGVKGLITAIDRFEPKRRLRL 1196
            +FANG KFQD CQAGVKGLITAIDRFEPKRR RL
Sbjct: 298  DFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRL 331


>ref|XP_002331841.1| predicted protein [Populus trichocarpa] gi|222875079|gb|EEF12210.1|
            predicted protein [Populus trichocarpa]
          Length = 512

 Score =  333 bits (854), Expect = 5e-89
 Identities = 180/334 (53%), Positives = 239/334 (71%)
 Frame = +3

Query: 195  MGVVTVSSSAARTPLGSTTRLSKYSFPTKRTSISMFKTDKTKNKALAAPKDAVSSAIEKS 374
            MG+V+VSSSA+ TPLG +T+ S      KR  I  FK DK+   AL AP + +   IE +
Sbjct: 1    MGIVSVSSSASWTPLGFSTKFSTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETT 60

Query: 375  KGKPKILRQTKKPLERVQAFSVAEAPSCPLDLDYYEAAAKLENIYKRSPAPELYDGQDKD 554
            K K K   ++KK  +R++A     +P C L +DY EAAAKLENIYK SP  +  D +D +
Sbjct: 61   KEK-KRRGKSKKSSDRLKAVRTEVSP-CTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVN 118

Query: 555  HGAKTVXXXXXXXIDEDEKTANKSIDNVVRSQKTDSKRLNLKKRIELRMNREAEAQSAAR 734
               +          + +++   ++   +VR+Q   +KRL+L+KRI LR+  + +  ++  
Sbjct: 119  GVIRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSDEKLVTSVG 178

Query: 735  KRKLTGENEIEKINRLVREYSVSTDLVSFDWKKMKIPPVLSSSEHTWLFKLMQPMKAILM 914
            KRK   +NE EKI+ LVREYS STDL S DWKKMKIPPVL+S+EH WLFKLMQPMKA L 
Sbjct: 179  KRK-GRKNENEKIDELVREYSSSTDLASLDWKKMKIPPVLTSAEHAWLFKLMQPMKASLQ 237

Query: 915  VKDNLRNDLGREPTDGELAQATGMNVVQLRKQIAVGQAARSKLIKHNLRFIMFVMNKYFQ 1094
            VK++L+ + GREPT+GELA+AT M+V+Q+RKQI VG+AAR+KLIKHNLR ++FV+NKYFQ
Sbjct: 238  VKEHLQENSGREPTEGELAEATDMDVLQVRKQIEVGRAARNKLIKHNLRLVLFVINKYFQ 297

Query: 1095 EFANGPKFQDLCQAGVKGLITAIDRFEPKRRLRL 1196
            ++ANGP++QDLCQAGVKGL+TAIDRFEPKRR RL
Sbjct: 298  DYANGPRYQDLCQAGVKGLMTAIDRFEPKRRFRL 331


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