BLASTX nr result

ID: Angelica22_contig00023003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00023003
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   238   5e-61
emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]   179   3e-43
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          164   6e-39
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   162   4e-38
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   159   2e-37

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  238 bits (606), Expect = 5e-61
 Identities = 118/176 (67%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
 Frame = +2

Query: 2   LSKHGTFVGFGYLCNGMFMLNVNTPFND-ESACMASTSTSNNLNKPELWHARLGHVHYKR 178
           LSK G FVGFGY CNGMFMLN+N   N    AC +   TS       LWHARLGHVHYK 
Sbjct: 359 LSKCGVFVGFGYFCNGMFMLNINKVVNSIYMACSSKNDTS-------LWHARLGHVHYKG 411

Query: 179 IKDMSKMSLIPAIDLNNEKCKTCMLTKITRMPFKDANRVSDVLELIHSDLCDFHSTPSLG 358
           + +MSK  LIP  D+N EKC+TCMLTKI R PFK   R S VLELIHSDLCD H+T SLG
Sbjct: 412 MIEMSKEGLIPTFDVNIEKCRTCMLTKIIRQPFKSIERNSKVLELIHSDLCDIHATSSLG 471

Query: 359 NKKYVVTFIDDASRYCYVYLLHAKDEALDFFKIYKEEVELHQSTMIKNLRTDRGGE 526
           NKKY +TFIDD SR+CYVYLLHAKDEAL+ FK+YK EVEL  S ++K LRTDRGGE
Sbjct: 472 NKKYFITFIDDYSRFCYVYLLHAKDEALEKFKVYKTEVELQHSDLVKKLRTDRGGE 527


>emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]
          Length = 487

 Score =  179 bits (453), Expect = 3e-43
 Identities = 91/182 (50%), Positives = 121/182 (66%), Gaps = 7/182 (3%)
 Frame = +2

Query: 2   LSKHGTFVGFGYLCNGMFMLNVNTPFNDESACMASTSTSNNLN------KPELWHARLGH 163
           L+K GTFVG GY+  G+F +NV   FND    +AST   + ++        ELWH+RLGH
Sbjct: 150 LTKSGTFVGKGYMSEGLFKINV---FNDN--VIASTINKSFMSFAYIVESCELWHSRLGH 204

Query: 164 VHYKRIKDMSKMSLIPAIDLNN-EKCKTCMLTKITRMPFKDANRVSDVLELIHSDLCDFH 340
           V+Y  +  M+ + L+   D+N  +KC+ C+ +K  R PFK   R S++LEL+HSDLCD  
Sbjct: 205 VNYHSMYKMANLGLLLKFDINETQKCEICVESKFARKPFKSIERSSELLELVHSDLCDLK 264

Query: 341 STPSLGNKKYVVTFIDDASRYCYVYLLHAKDEALDFFKIYKEEVELHQSTMIKNLRTDRG 520
            TP+ G  KY +TFIDD SR+CYVYLLH+KDE +D FK YK EVE H++  +K LR DRG
Sbjct: 265 MTPTRGGIKYFITFIDDYSRFCYVYLLHSKDETIDVFKTYKNEVENHENNTLKMLRFDRG 324

Query: 521 GE 526
           GE
Sbjct: 325 GE 326


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  164 bits (416), Expect = 6e-39
 Identities = 86/178 (48%), Positives = 116/178 (65%), Gaps = 3/178 (1%)
 Frame = +2

Query: 2   LSKHGTFVGFGYLCNGMFMLNVNT--PFNDESACMASTSTSNNLNKPELWHARLGHVHYK 175
           LSK+G +VG GY+ +G+F LNV T  P  +  A    TS++  L    +WH RLGHV++ 
Sbjct: 417 LSKNGMYVGKGYVNDGLFKLNVMTLKPTINNKA----TSSAYLLESSNIWHGRLGHVNFN 472

Query: 176 RIKDMSKMSLIPAIDLN-NEKCKTCMLTKITRMPFKDANRVSDVLELIHSDLCDFHSTPS 352
            ++ +  M  IP   ++   KCKTC+  K+TR  F+   R S+ L+LIHSD+CDF S  +
Sbjct: 473 SLRKLINMKHIPNFQIDLKHKCKTCVEAKLTRSSFQIIQRNSEPLDLIHSDICDFKSIQT 532

Query: 353 LGNKKYVVTFIDDASRYCYVYLLHAKDEALDFFKIYKEEVELHQSTMIKNLRTDRGGE 526
            G  KY +TFIDD ++YCYVYLL +KDEALD F +YK EVE   +  IK LR+DRGGE
Sbjct: 533 RGGNKYFITFIDDCTKYCYVYLLKSKDEALDKFILYKNEVENQLNRKIKELRSDRGGE 590


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  162 bits (409), Expect = 4e-38
 Identities = 83/176 (47%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
 Frame = +2

Query: 2   LSKHGTFVGFGYLCNGMFMLNVNTPFNDESACMASTSTSNNLNKPELWHARLGHVHYKRI 181
           LSK G +VG GY+ +GM+ LNV T         ASTST   L    LWH RLGHV+Y  +
Sbjct: 428 LSKSGMYVGKGYMSDGMWKLNVMTIIKSNMN-KASTSTYM-LESSNLWHGRLGHVNYDTL 485

Query: 182 KDMSKMSLIPAIDLN-NEKCKTCMLTKITRMPFKDANRVSDVLELIHSDLCDFHSTPSLG 358
           + +  ++ IP   +N N KC+TC+  K+TR  F+   R ++ L+LIHSD+CD     + G
Sbjct: 486 RRLINLNHIPTFQINSNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQTRG 545

Query: 359 NKKYVVTFIDDASRYCYVYLLHAKDEALDFFKIYKEEVELHQSTMIKNLRTDRGGE 526
             KY +TF+DD+++YCYVYLL +KDEA++ F +YK EVE   +  IK LR+DRGGE
Sbjct: 546 GNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGE 601


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/176 (44%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
 Frame = +2

Query: 2    LSKHGTFVGFGYLCNGMFMLNVNTPFNDESACMASTSTSNNLNKPELWHARLGHVHYKRI 181
            L+K+  FVG GYL +G+F +NV T            S++  L    +WH RLGHV+Y  +
Sbjct: 555  LTKNEMFVGKGYLSDGLFKMNVMTVVPKSINNNKIDSSAYLLKSSNIWHGRLGHVNYDTL 614

Query: 182  KDMSKMSLIPAIDLN-NEKCKTCMLTKITRMPFKDANRVSDVLELIHSDLCDFHSTPSLG 358
              +  +  +P  +++ N KC+TC+ +K+T++PF    R ++ L+L HSD+CD     + G
Sbjct: 615  CRLIHLDYLPKFNIDPNHKCETCVESKLTKVPFHSVERSTEPLDLFHSDICDLKFVQTRG 674

Query: 359  NKKYVVTFIDDASRYCYVYLLHAKDEALDFFKIYKEEVELHQSTMIKNLRTDRGGE 526
             KKY +TFIDD +RYCYVYLL +KDEA++ FK YK EVE   S  IK +R+DRGGE
Sbjct: 675  GKKYFITFIDDCTRYCYVYLLKSKDEAIEMFKHYKIEVENQLSKKIKAIRSDRGGE 730


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