BLASTX nr result

ID: Angelica22_contig00022929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022929
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28
ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ...   126   2e-27
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...   126   2e-27
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,...   112   4e-23

>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/104 (55%), Positives = 76/104 (73%)
 Frame = +1

Query: 1   EMVSCGIVPNVATRNVVIHSLCKTGSISLALDIIRDNYSESDTVSYNTVIWGFCKSRNVK 180
           EM+SCG++PNV T N+++H+ CK G +SLALD+IR+   + DTV+YNT IWGFC+     
Sbjct: 36  EMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVDIDVDTVTYNTAIWGFCQQGLAN 95

Query: 181 LGFALCSEMVKKGIPFDSFTCNILVKGFCELGLLEDAEWVVDRM 312
            GF   S MVKK   FDSFTCNILVKGFC +G ++  EWV+D +
Sbjct: 96  QGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNL 139



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
 Frame = +1

Query: 1   EMVSCGIVPNVATRNVVIHSLCKTGSISLALDII---RDNYSESDTVSYNTVIWGFCKSR 171
           +M++ G+ P + T N+++  L   G +S A +I+   +D+  + D   YNT+I G  K  
Sbjct: 670 QMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIG 729

Query: 172 NVKLGFALCSEMVKKGIPFDSFTCNILVKGFCELGLLEDAEWVVDRM 312
           N K       EMV KG+   + T N+L++ F ++G ++ A  +++ M
Sbjct: 730 NKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEM 776


>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  128 bits (321), Expect = 5e-28
 Identities = 59/104 (56%), Positives = 78/104 (75%)
 Frame = +1

Query: 1   EMVSCGIVPNVATRNVVIHSLCKTGSISLALDIIRDNYSESDTVSYNTVIWGFCKSRNVK 180
           EMV CG+VPNV + N+++HSLCK G + LAL  +R+  S  D V+YNTV+WGFCK     
Sbjct: 35  EMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRN--SVFDHVTYNTVVWGFCKRGLAD 92

Query: 181 LGFALCSEMVKKGIPFDSFTCNILVKGFCELGLLEDAEWVVDRM 312
            GF L SEMVKKG+ FDS TCNILVKG+C++GL++ AEW++  +
Sbjct: 93  QGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNL 136



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
 Frame = +1

Query: 1   EMVSCGIVPNVATRNVVIHSLCKTGSISLALDIIRDNYS---ESDTVSYNTVIWGFCKSR 171
           +M+  G++P+V T + +++ LC+ G ++ A  ++R+ Y+   + + VSY T+I    KS 
Sbjct: 261 QMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSG 320

Query: 172 NVKLGFALCSEMVKKGIPFDSFTCNILVKGFCELGLLEDAE 294
            V   F   S+MV +GI  D   C  ++ G  + G  ++AE
Sbjct: 321 RVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAE 361


>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503561|gb|AES84764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/102 (56%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   EMVSCGIVPNVATRNVVIHSLCKTGSISLALDIIRDN-YSESDTVSYNTVIWGFCKSRNV 177
           +M+ CG+VP+V + NV++HSLCK G + LAL  +R+N   + D V+YNTVIWGFC+   V
Sbjct: 119 DMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLV 178

Query: 178 KLGFALCSEMVKKGIPFDSFTCNILVKGFCELGLLEDAEWVV 303
             GF L SEMVK+G+ FDS TCNILVKG+C +GL++ AEWV+
Sbjct: 179 DQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = +1

Query: 1   EMVSCGIVPNVATRNVVIHSLCKTGSISLALDIIRDNYS---ESDTVSYNTVIWGFCKSR 171
           +M+  GI+P+V T + +++  C+ G ++ A  + R+ Y    + + VSY T+I    KS 
Sbjct: 346 KMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSG 405

Query: 172 NVKLGFALCSEMVKKGIPFDSFTCNILVKGFCELGLLEDAEWVVD 306
            V   F L S+MV +GI FD  TC  ++ G  ++G  ++AE V +
Sbjct: 406 RVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFE 450


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503316|gb|AES84519.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/102 (56%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   EMVSCGIVPNVATRNVVIHSLCKTGSISLALDIIRDN-YSESDTVSYNTVIWGFCKSRNV 177
           +M+ CG+VP+V + NV++HSLCK G + LAL  +R+N   + D V+YNTVIWGFC+   V
Sbjct: 119 DMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLV 178

Query: 178 KLGFALCSEMVKKGIPFDSFTCNILVKGFCELGLLEDAEWVV 303
             GF L SEMVK+G+ FDS TCNILVKG+C +GL++ AEWV+
Sbjct: 179 DQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = +1

Query: 1   EMVSCGIVPNVATRNVVIHSLCKTGSISLALDIIRDNYS---ESDTVSYNTVIWGFCKSR 171
           +M+  GI+P+V T + +++  C+ G ++ A  + R+ Y    + + VSY T+I    KS 
Sbjct: 346 KMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSG 405

Query: 172 NVKLGFALCSEMVKKGIPFDSFTCNILVKGFCELGLLEDAEWVVD 306
            V   F L S+MV +GI FD  TC  ++ G  ++G  ++AE V +
Sbjct: 406 RVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFE 450


>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1016

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/104 (50%), Positives = 71/104 (68%)
 Frame = +1

Query: 1   EMVSCGIVPNVATRNVVIHSLCKTGSISLALDIIRDNYSESDTVSYNTVIWGFCKSRNVK 180
           EM+   + PNV T NV++H+ CK G++ LALD++R+   E DTV+YNTVIWGFC+   V 
Sbjct: 35  EMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVN 94

Query: 181 LGFALCSEMVKKGIPFDSFTCNILVKGFCELGLLEDAEWVVDRM 312
             F   S MVKK   FD+ TCNILVKGFC +GL +  E ++D +
Sbjct: 95  QAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNL 138


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